Colossoma macropomum (tambaqui): 118818414
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Entry
118818414 CDS
T09004
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118818414 (tsen34)
Enzymes [BR:
cmao01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
118818414 (tsen34)
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
118818414 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
118818414
NCBI-ProteinID:
XP_036441559
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MDREHRAEERGAPNGNAAAERSEEEGARTESDRDAESERRLSISFCGDAPFLWRVGDIKR
AREEDGVVGALVGSLARQPRQNVRLGRPLEVLQEEACLLLERRRAAAVRHKHKQENEESR
LKAVQEYQARLERSYEEQCYLALEDKKAVLQRVMNEKQNDHSGNGDTERAVRERLSSLEK
SFCFPRSSMAVQLCTARAGFGHCPEEVGFLAADWPMPRDKRSETRFRVYRDLRRKGFYLT
SAGKFGGDYLVYPGDPLRFHSHFIALCLSMDEHSPLCDILAIARLGSNVKKTVLLCSPRD
PSDGEVEEEVVYSSLQWSGMV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggagcaccgcgctgaagaacggggcgctccgaatggaaacgcagctgcggag
aggagtgaagaggagggcgctcggactgagagtgaccgggacgcggagtcggagcgacgt
ctcagcatcagcttttgcggagacgcgcctttcctctggagggtgggcgacattaagaga
gccagggaggaggacggggtggtcggggctctggtgggctctctggccaggcagccgagg
cagaatgtgcggttagggagaccgctggaggtccttcaggaggaggcgtgtttgctgctg
gagagacggagagctgctgctgttcgacataaacacaaacaggaaaatgaagaaagccgt
ttgaaggctgttcaggagtaccaggccagactagagcgcagttatgaggagcagtgctat
ctggccctagaggacaagaaagcagtgctgcagagagtaatgaatgagaaacagaatgat
cactcaggtaatggggacacagagcgggcagtgagagagcgtctcagctccctggagaaa
agcttttgcttcccccgttcctccatggcagtccagctctgcactgcccgcgctggtttc
ggtcactgccctgaagaagtcggcttcctggctgccgactggccaatgcctagagacaag
cggtcggagacgaggttccgggtgtacagggacctgaggaggaagggtttctacctgact
tcagcggggaagtttgggggagactatctggtgtatccaggtgatccactccgttttcat
tcccacttcattgcgttgtgcctgtctatggatgaacattcaccgctctgcgatattctt
gctatagcacgcctgggttccaatgtgaagaaaacggtgctgctttgctccccacgagat
cccagtgacggtgaagtggaggaggaggttgtgtattcttctcttcagtggagtggaatg
gtatag
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integrated database retrieval system
