Colossoma macropomum (tambaqui): 118818431
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Entry
118818431 CDS
T09004
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118818431 (ptbp2a)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118818431 (ptbp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
118818431
NCBI-ProteinID:
XP_036441584
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MDGISDVAVGVKRGSDELLSSSMYNSPNSGMSSISDGTSNGSDSKKLRVEDRVGDAPPSR
VLHIRKLPNEVSEADIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAITMVNYYSAVTP
HVRNVPVFIQYSNHKELKTDNANQSGGTPTSGSSDGTLTSPSSPVLRIIIDNMFYPVTLD
VLQQIFSKFGTVMKIITFTKNNQFQALLQYSDAASAQQAKVALDGQNIYNACCTLRIDYS
KLVNLNVKYNNDKSRDYTRPELPSGDGQPAVDPSVAAAFSKDSNSLLGKIPGALSPLSAA
AAAAAAAGRVALSGHSGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSA
LIQMADSNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHR
FKKPGSKNFQNIFPPSATLHLSNIPQDITEDDLRVLFTNSGGTVKAFKFFQDRKMALIQM
STIEEAIQCLIDLHNYNMGNNHHLRVSFSKSII
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattagtgatgttgcggttggtgtaaagagaggatcagatgagctgttgtcc
agcagcatgtacaacagtccaaactcagggatgagcagtatcagtgatggcacatccaat
ggaagtgacagcaaaaagttaagagttgaagacagggtaggggatgctccgccttcgcgt
gtcctccacatcagaaaactacccaatgaagtctcagaggcagatatcattgctttagga
ttgccttttggaaaggtcactaatatccttactcttaaaggcaagaaccaggctttcctg
gaactgagtacagaggaggcagccattaccatggtgaactactactcagctgttacacca
catgtccgaaatgtccctgtcttcatacagtattccaatcacaaagaacttaagacagac
aatgcaaaccagtcaggtggaaccccgacatcaggctccagtgatggtactctcacgtca
ccttctagtccagtgctgaggattatcattgacaacatgttctaccctgtcacattggat
gtgttgcagcagatcttctcaaagtttggcacagtcatgaaaatcatcacgttcacaaag
aacaatcagtttcaggctttgctacagtacagtgatgcagcgagtgctcaacaagccaaa
gtggcgctggatggtcagaacatttacaatgcttgctgtacactccgcatagactactcc
aaacttgttaacctgaatgtgaagtacaacaatgataagagcagggactacaccagacca
gagctgccttcaggtgatgggcagcctgctgtggatccctctgtggcagcagcctttagc
aaggactctaactccctgctcggtaagatcccaggtgcgctgagccctttaagcgcagcg
gctgcagcagcagcagcggcagggagagtggctttgtcgggacattcaggcagcagtggc
gtgctcttagtcagcaatcttaatgaagagatggttacgccccaaagtctgtttaccctc
ttcggggtgtatggtgatgtgcagcgtgtgaagatcctctataacaaaaaagacagtgca
ttgatacagatggcagattcaaatcaagcccaacttgcgatgagtcatctcaatggacag
aagatgtattcaaagatcatccgtgttaccatgtccaaacatcagacggtacagttacct
agggatggtttggatgatcagggcctcaccaaggatttcactaattctcctctacatcgt
ttcaaaaagcccggctctaagaactttcagaatatcttccctccttctgccaccctccat
ctgtcaaacataccacaagacataactgaagatgacctcagagtactgttcactaactcc
ggaggcactgtgaaagctttcaagtttttccaagatcgcaaaatggctctaatccagatg
tctacgattgaagaggccattcagtgtttgatcgaccttcacaactacaacatgggtaat
aaccaccatttgagagtctccttctccaaatcaataatttaa
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