Colossoma macropomum (tambaqui): 118818435
Help
Entry
118818435 CDS
T09004
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118818435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118818435
03036 Chromosome and associated proteins [BR:
cmao03036
]
118818435
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118818435
Coactivators
SAGA/TFTC/STAGA complex
118818435
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118818435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
118818435
NCBI-ProteinID:
XP_036441589
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGRSDPATGAGSSGSATAASVTARGGGG
GANHRLARALPARAGSTSEQQQQQQQQQQQQQRKAGTGQDSDSGAKQDSSSSESGRASAP
RSLGTSASSSSSPTGSVPEGLALTGTSPVSSGPGNNKGASSRDYDTRKKQQHATVRTRRS
GAQSVNGDSAATTATATASSPAKSDNNNTTSHPAAAAAPGSVTAASSRAVTGTTATTTMT
TTTTTTFTVSGTGSSASSIALDRGTPTIALHRLPSHIVASLAQNRNGTTTVSALVQQGAL
GPAPPPPPTPPPPPPPPQVNHSKSAAEAAKPSGPKAAAPAATAAPSQNSVPLPSAPAPVT
TTSSAAVTSSPGPVAVTTVATVTVTTAVTTAATVRLAPPANVAPPQPPQVRTALAAPQRI
VAPQLIVRAPQQQATIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQAQAQAQAQAQ
AQVQAQAQSNLSPRPATPTTGATFRVTTPQSPVSSQASRAGPALQSKVVQSPTPSPAPQT
STAASAALTRAPLAATAVAVTAPQQVPAALGPQGPHGQPTLAPPSAAGPAPGAPVISQEM
QENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIEPEEFTNRLQSELKSSP
QPYLVPFLKKSLPALRLSLLNSQQSLTQPLQPAKTGITPTGAVAGAVATGNAVRQPNSTT
VLPQGVKRVGGVAGQGQVRMPVVITQTVRPAGAVGKCPVVQTSKSPTALPVQLSGTPKNK
LNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLPTGLLH
RRILETAKKYGVTEVPLEAVNFISHATQSRLRTVLEKVTSIAQHRMDSNKDEEWYEQSSD
VRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQM
RQRDANLTALAAIGPRKKRKVDSPGATTSGTEVSGGSAGSPASSSSVSTSSRQYPRQRIT
RVNLRDFIFYMEQERETNRSLLLYRALLK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctgttctcggaggtggatgagaaagcc
gtcagcgacctggtgggctctctggagtcgcagctcggcggccggagcgacccggcgacc
ggggcggggtcatcggggtccgcaacggcagcgtcggtaacggcgcgcggaggcggcggc
ggcgcgaaccaccgcttggcgcgagcgctgcctgcgcgagcgggcagcacatccgagcag
caacaacaacaacaacagcagcagcagcagcagcagcgtaaagccgggaccggacaggac
tcggacagcggcgccaaacaggacagctcgagctcggagagcgggagagcgagcgctccg
cgatcacttggaacgagcgcaagcagcagcagcagcccgaccgggtctgtacccgagggg
ctcgcgctaacgggaacttctccggtcagcagcgggcccggtaacaacaaaggtgcgagc
tcgcgggactacgacacgcgtaaaaaacagcagcacgcgacggtgcggacgaggcgctcc
ggagcgcagagcgtgaacggcgacagcgcagctaccacagcaacggctacagcgagctct
ccggccaagagcgacaacaacaacaccaccagccaccccgctgctgctgctgctcccggc
tcagtgacagcggcgtccagccgcgcggtgacgggaacgaccgcaacgaccaccatgaca
accacgacgaccacaacgttcactgtgagcggcaccggctcctccgcgtcctccatcgcg
ctggaccgggggacccccaccatcgcgctgcaccgactcccgagccacatcgtcgccagc
ctcgcgcagaaccgcaacggcacgacgacagtgtctgcgctcgtgcagcagggcgcgctg
ggtcccgctccgccgccgccgccgacgccgccgccgccaccgccgccgccgcaggtgaac
cacagcaaaagcgccgccgaagcggcgaaaccgagcggtcccaaagcagctgcacccgct
gccacagccgcgccgagccagaactcagtaccgttacccagcgctccggcgcccgttacc
accacctcgagcgcggccgttaccagctcgcccggtcccgtggccgtaaccaccgtcgcc
accgtcaccgtgaccacagcggtcaccacagcggccacggtgaggctcgcgccccccgct
aacgtcgcgccgccgcagcctccccaggttcgaaccgcgctcgcggcaccgcagcggatc
gtagccccgcagctgatcgtcagagctccgcagcaacaggcgaccattcagctgcctccc
ggtttcaccatcccgcccgggatggttttggtgcggacggagctcgggcagctggtgatg
gttccccagcaggcgctggctcaggctcaggctcaagctcaagctcaggctcaggctcaa
gcgcaagttcaagctcaggcccagagtaacctgtccccccggcctgcgaccccaaccacc
ggagccaccttcagagtcaccactccccagtctcctgtctcctctcaggcctctcgggct
ggtcccgcgctccagtcaaaagtggttcagtcccccaccccgagtcctgctcctcagacc
tcgactgctgcttctgctgccctcactagggcgccgttggcggcaacggccgtggcggtg
acggctccccagcaggtccccgcagcactgggcccccaggggccccacggtcagcccacg
ctggcccctcccagcgcagccggccccgcccctggagctcctgtcatctcccaggaaatg
caggagaacgtgaaaaagtgcaagaactttttggcaacactaatcaaactggcatcccat
aattccccctccccggagacgtcccggaacgtgaaggcgctggtgcaggacctgctggat
gccaaaattgaaccggaggaattcaccaaccggctacagtctgagctaaagtcgtcaccc
cagccttacctggtccctttcctcaagaaaagtctgccggcgttgcggctgtccctgttg
aacagccagcagtccctcacgcagcctttacagcccgccaagaccggcatcaccccaact
ggagctgtcgccggggctgttgccactggtaacgctgtacggcaacccaacagcaccact
gtgctgccacaaggtgttaagagggtaggaggtgtagcagggcaagggcaggtccggatg
cctgttgtcatcacacaaacggtgcggccagcaggtgctgtagggaaatgtccagttgtg
cagacgagtaaaagccccacagcgcttcccgtccagctctcagggaccccgaagaacaaa
ctcaacgaccccgggggaggctccttcagggacgatgatgacatcaatgatgtggcgtct
atggccggggtcaacctgaatgaggagagcgcccgtatcttagcaaccaactcggagctg
gtgggcacgcagatccgctcatgtaaagacgaggcctttctgcccacaggcctgctgcac
cgccgcatcctggagacggctaagaagtacggggtgaccgaggtgcctctggaggcggta
aacttcatctctcacgcaacgcagtcgcgtttacggacagttctggagaaggtcacgtcc
atcgcccagcacaggatggactccaacaaggatgaggagtggtacgagcagtcgtcggac
gttcgctctcagctgaagttctttgagcagctggaacggctggagaaacagaggaaagac
gagcaggagagagagattctccttaaagcagctaaaagccgctcgaggcaggaggaccca
gagcaggctcgtttgaagcagaaggcaaaagagatgcagcagcaggaactggcccagatg
aggcagagagacgctaacctgacggctctggccgccatcggcccgcggaaaaagcgcaag
gtggactcgccgggagccacgacgtcgggcactgaggtgtccggaggttccgccggttct
ccagcttcttcgtcctcagtatccacgtcctcacggcagtacccccgccagcgaatcaca
cgcgtcaacctcagggacttcatcttttatatggagcaggaacgagagacgaaccgatcg
ctcttactctaccgcgctctgctgaagtag
DBGET
integrated database retrieval system
