Colossoma macropomum (tambaqui): 118818473
Help
Entry
118818473 CDS
T09004
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118818473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118818473
03012 Translation factors [BR:
cmao03012
]
118818473
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118818473
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118818473
Translation factors [BR:
cmao03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118818473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
nSTAND3
ATPase
AAA_19
AAA_14
NACHT
NB-ARC
AAA_16
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
118818473
NCBI-ProteinID:
XP_036441633
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDESREQHITQLLNSVQRGPPQEAHPSAFPYQQMKQEPSGHSYFDGDDPLEQQQQPVKVT
KIEPKVERETEKEEMKMKVKEEPNERDLEYLFQDLVQKPSLDAELRSDFQAKLENPKYLE
MLKFREKLPSYGMREELVNLIEANRVVVVSGETGCGKTTQVTQFILDDYIQRGLGSLCRV
VCTQPRRISAISVAERVAAERAEPVGEGRSCGYQIRLQSRLPRKQGSVLYCTTGIILQWL
RSDPCLSSISHLVLDEIHERNLQSDVLLTIVKDLLGTRDDLKIILMSATLNADKFSKYFG
NCPMIHIPGYTYPVKEYLLEDVVEMLRFRPQQQDRRPRFRRGFMQGQSAWPEKEQKEAEY
KESWPCYARTLRDRYSDSTIDALEMMDEDDKINLELIAALIRHIVMNEDDGAILVFLPGW
DNISSLNDLLMADQMFKSDKFIIIPLHSLMPTVSQTQVFKRPPPGVRKIVIATNIAETSI
TIDDVVYVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRKGRAGRVSPGKCYHLYNGL
RASLLDSYQLPEIQRTPLEELCLQIKVPRLRVGVGVCVGVGENGGLCSPLCGWWYTVEIS
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatccagagagcagcacatcacacagctcctgaattcagtccagcgagggccg
ccccaagaagctcacccctctgcctttccgtaccagcagatgaagcaggagcccagcggc
cacagttactttgatggggatgatcctctggaacaacagcagcagccagtgaaagtgaca
aaaatcgagccaaaggtggagagggagacagaaaaggaggagatgaagatgaaagtgaag
gaggaacccaacgaaagagatctggaatatctgtttcaagatttggttcaaaagccgtca
ctggatgcagagctgaggagtgattttcaagctaaactagagaatccaaaatacctggaa
atgctgaaattcagagagaagttgccctcctacggcatgagagaggagctggtgaatctg
atagaggcgaaccgcgtggtggtggtcagcggtgaaactggctgcggcaaaaccacgcag
gtcacacagtttatcctagacgactacatccagcgtggattgggctccctctgcagggtg
gtgtgcacccagccaagacgcatcagcgccatatccgtggcagagagggttgcagcggag
agggcggagcctgtcggagaggggcggtcctgcgggtatcagattcgtctgcagagccgg
ttaccacggaaacagggctcggtgttgtattgtacgacgggaattattcttcagtggctg
cgctctgatccgtgtttgtccagcatcagtcacctagttctggatgagatccatgagcgg
aatctacagtctgatgttctcctgaccattgtaaaggacctgctggggaccagggatgac
ctcaagatcatcctcatgagcgccacgctcaacgccgacaaattcagcaagtactttgga
aactgccccatgatccatatccctggctacacctacccagtcaaggagtacctgctggag
gatgtggtggagatgctcaggttccggccgcagcagcaggaccggcggccccggttccgg
agaggcttcatgcagggtcagagcgcgtggcctgagaaggagcagaaagaggcagagtac
aaggagagctggccctgctacgcccgcacactcagagacaggtactcagacagcaccatc
gatgccctcgagatgatggacgaggatgacaagatcaatctggagctgattgcagcactc
atccgccacatcgtgatgaacgaagacgacggcgctatcctggtgtttctgcctggctgg
gacaacatcagcagcctgaacgatctgcttatggccgaccagatgtttaaatccgataag
ttcatcattattccactgcactctctgatgcccacggtcagccagacacaggtttttaaa
aggccgccacccggagtccggaagattgtgatcgccacgaacatcgcagaaaccagtatt
actatagatgatgtggtgtatgtgatcgatggagggaagatcaaagagacgcactttgac
acccagaacaacatcagcactatgactgcggagtgggtgagcctggccaacgccaagcag
aggaaaggacgagccggcagggtgtctccaggtaaatgctatcacctgtataacggtctc
agggcgagtctactggacagctatcagctccctgagatccagcgcaccccactggaggag
ctctgcctgcagataaaggtaccacgactaagagtgggtgtgggtgtgtgtgtgggtgtg
ggtgagaatgggggtctatgttctcctctgtgtggttggtggtacacagtggagatcagt
gagtga
DBGET
integrated database retrieval system
