Colossoma macropomum (tambaqui): 118818733
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Entry
118818733 CDS
T09004
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118818733 (lingo3a)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118818733 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRRNT
LRR_9
Cupin_1
LRR_Zer-1
V-set
Motif
Other DBs
NCBI-GeneID:
118818733
NCBI-ProteinID:
XP_036441991
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAVCPVLSLLGLLLLLITAPTSQGQGCPQRCDCVPQSKAVNCQNKRLSSVPNGIPIDTRL
LDLSGNSLRWVEHGDLAAFVHLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSHLANLTTLDLSGNKLVILLDFTFQDLRSLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLQYI
SPHSFQGLNLSWLSITNTNITTVPTGALRSLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNMVSVQTYGFGGLQQLRLLNLSNNRLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDGKSPVCAAPVEVQDKALNSFSDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFFCRAEGEPTPVIFWISPQRRRITTKSTGRIIVLPEGTLEIRYAQITDSGTY
ICIASNAGGNDTYFATLTVSGLPLDAAVAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPTTSGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctgtccagtcctgagcttgctgggccttcttctgctactgatcacagcaccc
acatcccaaggccaaggctgtccacagcgctgtgactgtgtgccccagagtaaggctgtg
aattgccagaacaaacgtctcagttctgttccaaatggaattccaattgacacacggctg
ctagacctcagtggcaacagtttgcgttgggtggaacatggcgatctggcagcctttgta
catttggaagaattagatcttagtgagaatctcatcagtgtgctagagcctaatgcgttt
tccagcttattgaatctacgtgtgttacgcctgcgcgccaaccagttgaagctggtgcca
atgggtgccttctcgcatcttgccaatctcactactttggacttgagtgggaataaactg
gttatcttgttagacttcactttccaggatctgcgtagcctaagaaacttggaggtggga
gataacgacttggtgtacatctcaaacaaggcattcctgggcttggttggactacgtgag
ctcacaatcgagaggtgcaacttgacatctatctcaggccagtctctttcctacctccgt
ggtttggtcacgctgcgactacgctacctcagcattgcctcattagaggagcagaacttc
cgtaagctgggtggattgcggggtctagagattgaccactggccattcctacagtacatt
tccccacacagttttcagggactcaatttgtcctggctgtcaataaccaacaccaacatt
accacggttcctactggtgcccttcggagcctgatccatttagccagcctgaacctttct
tacaaccccatctctgtgctggaatcttgggccttgcgggacctggtccgtttaaaggag
ctgcaccttgttggcaccaacatggtatcagtgcaaacttacggttttggaggcctgcag
cagctccgtctgctcaatctgtccaacaacaggttggtgacgctagaggagggctctttc
cactcagtaaacacgttggaaacactacgcgttgatggtaacccactttcttgtgactgc
cgcctgctttggatcctgcagcgacggaagaccctcaactttgatggcaagtcaccagtt
tgtgctgcgcctgttgaggtgcaggacaaggctctcaactccttctccgactctgcgctt
ttcgaccacttcacctgccaacggccaaagatccgcaacagaaaactgcaacagctgacc
gcacgcgagggtcaggtggtgtcctttttctgtcgtgcagaaggagagccgactccggtc
atattttggatttcacctcaacgccgtcgcatcaccactaagagcaccggccgtatcatt
gtgctaccagaaggcacgctagaaatccgctatgcccagataacagacagtgggacctac
atctgcattgccagcaatgctggtggcaatgacacttattttgcaacactaacggttagt
gggctgccactagatgcagctgttgcagcaaatcgcacctactatgtgggtgacctcaat
gacactaatctgaatgacacacgtgtcttcctgaagttcacattagaccttaagaccatt
ctggtctccacagccatgggctgtatcacatttttgggtgtagttcttttctgcttcttg
cttttattcgtgtggagtcgtggacgtgggcaacacaaaaacaacttctcagtagagtac
tccttccgaaaggtggatggccccacaaccagcgggggccaaggaggggctagaaaattt
aatatgaaaatgatataa
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