KEGG   Colossoma macropomum (tambaqui): 118818843
Entry
118818843         CDS       T09004                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118818843 (kdm4b)
Enzymes [BR:cmao01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118818843 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118818843 (kdm4b)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118818843 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF4537 53-BP1_Tudor Saf4_Yju2
Other DBs
NCBI-GeneID: 118818843
NCBI-ProteinID: XP_036442237
LinkDB
Position
Unknown
AA seq 1182 aa
MLLTEFFLYGGGGQQAGRENVKKQHICCTNSLFSPTCLYIDGFTRRCLNNPHQTLSISLP
AAMSVENSTDEAMDPQDPAPNPTSKSPELNSQPPEGPAVEASADPAPAPAPPPAANSAYK
IMTFRPTMEEFQDFEKYITYMESQGAHRTGLAKVIPPKEWKPRRSYETIEEMVIPAPIMQ
VVTGQSGLFTQYNIQKKSMTVGEYRKLANSKKYCTPQHKDFDDLERKYWKNLTFVSPIYG
ADISGSLYDPDITEWNIGHLNTLLDMVEQECGIIIEGVNTPYLYFGMWKTTFAWHTEDMD
LYSVNYLHFGQPKSWYAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKY
SIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQCTCRKDMV
KISMDVFVRCLQPDRYELWKQGKDATVLDHQKPTNLTSPELEHWRKNRVTFREKMLRRAQ
QKVKQLRRLKLEELKVLAEEGVELDVADYQRRVEEKEAQRRQQREEKMAREAMKTLEALE
REEQEAALRGEADAQQLSQVDVKKEEEKDGEKDGEKEEKKKKKKKKPLPPEQVTFQQAFE
QFAASRAVEGQNNGNAVSDPGLQTNSFPKMKMKVEVKKSRRHPFSKPPTRTPLFIVKQEA
SSDEELYSGLPVGGGVEQEAKKPEEGLLWQNRSPNFLAEKQFNAALATIEPHCAVCMLFC
PYSQPHKDPPAGTVSLCGTRTRPLVPEMCFSAGAENTEPLPSSARIGEDGTSVLLACTSC
NLQVHASCYGVKPDTKQEGWMCSRCTAVAWTAACCLCNLRGGALKMTTDDRWVHVICAIA
VAEARFVNAVEREPVDVMAIPDTRKSLKCIYCHKTTKQICGACIQCSYENCSTSFHVTCA
HLAGVVMKPADWPYVVSVTCHKHRQIIPKVKVGPRDLSLGQEAIGRNSDGWFYRCTIIGV
ASQTFYEVNFDDGSYCDNIYPENVLSHDCLRNGPPELGELVVVNTIDGRVLNASFVKEHV
HRFYQVEFQDESQLLLKQSEIHSLNQELPKRVMTRLASVNTQDPQAQTPDGPQAAKRPRL
PTPPPTATTESLQSPISSYSGLSITPGISTSTSASSDPMATPPGPMATPSDPMVATVAVP
PAPQAEAGERYTHSSSYIAYMESLLNSDFPPDEGERGPEPMF
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgttgttgactgagttttttttgtatggaggaggagggcagcaggcaggaagagagaat
gtcaaaaagcagcacatctgctgcacaaactcgttattctcgcctacttgcctgtacata
gatggttttacacgacggtgccttaataatccgcatcaaactctaagcattagcctacct
gcagctatgtcagtagaaaactctacggatgaagccatggacccacaggacccggctcca
aatccgacttctaagtctccagagctaaactcgcagccgcctgagggaccagctgtagaa
gcgtctgcagatcctgctccagcccccgcgcctccaccggctgcaaactcggcctacaag
atcatgaccttcagaccaaccatggaggaattccaggactttgagaagtatattacatac
atggagtcccaaggagctcaccgcaccggcttggccaaggttattcctcctaaagagtgg
aagcccagacgatcctatgagacgatcgaggagatggtcattccagcccccatcatgcag
gtggtcactggccagtctggtcttttcacccagtacaacatccagaagaaatccatgaca
gttggagaatacagaaaactggccaacagcaaaaagtactgcactcctcagcacaaagac
tttgatgacctcgagagaaaatactggaaaaatctgacgttcgtgtctccgatctacggt
gcagatatcagtggatccctctatgatccggacattacggagtggaatattggtcatctg
aacacactcctcgacatggtagagcaggagtgtggcatcatcatcgagggtgtaaacaca
ccctatctgtatttcggcatgtggaagaccaccttcgcctggcacacggaggacatggac
ctctacagcgtcaactaccttcacttcggccagccaaagtcctggtatgccatccctcct
gaacacggaaagaggctggaaagactcgcgcaagggtttttcccaggcagctctcagggc
tgtgatgcttttcttcgtcacaagatgaccctcatctctccctccattctgaagaagtac
agcatccccttcgacaggatcactcaggaggcgggcgagttcatgatcacgttcccgtac
ggctaccacgccggcttcaaccatggcttcaactgcgcagagtccactaacttcgccaca
ctgcgctggatcgactacggaaaaatggccacacagtgcacgtgtcgcaaggacatggtg
aagatctctatggatgttttcgttcgctgcctgcagcctgaccgctacgagctgtggaag
cagggaaaggacgcgacggtgctggaccaccagaagcccaccaatctcaccagccctgaa
ctggagcactggaggaagaaccgggtcaccttcagagagaaaatgctccgcagagctcag
cagaaagtgaagcagctgcgcaggctgaagctggaggagctgaaggtgctggccgaggag
ggcgtcgagctggacgtggctgactatcagcggcgtgtggaggagaaggaggcgcagagg
aggcagcagagggaggagaagatggccagggaggcgatgaagactctggaggctctggag
agagaggagcaggaggcagcgttgcgaggagaggctgatgcccagcagcttagccaggtg
gatgtaaagaaagaagaagaaaaggatggagagaaggatggagagaaggaagaaaagaag
aagaaaaagaagaagaagccgctgccacctgagcaggtgactttccagcaagccttcgag
cagtttgctgcgtccagggcggtcgagggacagaataacggaaacgcggtctcagatcca
ggcctacagactaactcattcccgaagatgaagatgaaggtggaggtgaaaaagagtcgc
aggcatccgtttagcaaaccgcccacgcgcaccccgctcttcatcgtcaaacaggaggca
tccagcgatgaggaactgtactcagggctgccagtcgggggcggtgtggagcaggaagca
aagaagccagaggagggacttctgtggcagaatcgctcgcccaacttcttggcagagaag
cagttcaatgctgccttggcgaccatcgagcctcactgcgccgtctgcatgctgttctgt
ccatactcgcagcctcataaggaccccccagctggcacagtgtctctgtgtggaactcgg
acccggccactggttcctgagatgtgctttagcgctggagcggagaacaccgagccgctg
ccctccagcgcccgcatcggagaggacggcaccagcgtgctgctggcctgcaccagctgc
aacctgcaggtccatgccagttgctatggcgtcaagccagacactaagcaggagggttgg
atgtgttctcggtgtactgcagtggcctggacagcggcctgctgtttgtgtaacctcaga
ggaggtgcgctgaagatgacgacggacgacaggtgggtgcacgtgatttgcgccatcgct
gtggctgaggcacgattcgttaacgccgtggagagagaacctgtggatgtgatggccatc
ccagataccaggaagagtctaaagtgcatctactgccacaagaccacaaagcagatctgc
ggagcgtgtatccagtgttcgtatgagaactgctccacctccttccacgtcacctgtgcc
cacctggccggagtggtcatgaagcctgctgattggccgtatgtggtgtccgtcacgtgt
cacaagcacaggcagatcattccgaaggtgaaggtgggcccacgagacctctctctggga
caggaggccatcggccggaacagcgacggctggttttatcgctgcaccatcatcggagtc
gcctcgcagaccttctacgaggtcaacttcgacgatggctcgtactgcgacaacatctac
cctgagaatgtactgagtcatgactgtttgcgtaacggtcctcctgagctgggcgagttg
gtagttgtaaacacgatagacgggcgtgttctcaacgcttccttcgtcaaggagcacgtg
caccgattttatcaggtggagtttcaggatgagtctcagctgttgctgaagcagagtgag
attcactctctgaaccaggagctgcccaagagagtgatgacccgtctggcgtcggtgaac
actcaggaccctcaggctcaaactcctgacgggcctcaggctgcaaagcgtccaaggctg
cccactccgccccccacggccactacagagtcgctgcaatcccccatctcctcctattca
ggcctcagtattacccccggcatcagcaccagcacttctgcctcttctgaccccatggct
acccctcctggccccatggctaccccttctgaccccatggttgccactgtagctgtccct
cctgcccctcaggctgaggctggcgagcgctacacacacagctccagctacatcgcctac
atggagtctctcctcaactcggactttcccccagacgagggcgagcgcgggccggagccc
atgttttag

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