Colossoma macropomum (tambaqui): 118818866
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Entry
118818866 CDS
T09004
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03015
mRNA surveillance pathway
cmao03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118818866
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118818866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118818866
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
118818866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
118818866
NCBI-ProteinID:
XP_036442277
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MAAAEHVDIYDEELKAEEEEAGDFLSAENDALYDDVLTGSVSSEAPLEKQKTKEDNKPEV
VYTYKGCTADKSKRFAVYVGNFSWWTSDKDLISVARTLGVKDVVDIKFAENRANGQSRGF
AEIVVSTEESVKRLIETMPQCQINGEKVDCRSATRKNLAVFEAQARKRIPQRSNSKTDSD
KADSRSSISSPTDLQLPPLPPVFPPPPHITKPPSLLPSFFNPLPPPFPPPHLQAPPLPHL
FPPPSPHMPNTHTPPPHIPNTHTPSLHINPAFFPPAHDTHNSSTAYGRHSREGDIPAVLT
PEGEFEELMNRNRTIASSAITKAMSGATTGDVSMAIETLLTAIAVIKQSRVYSDERCRAL
VESLKDCLYSIESKSYGSRKRHRSRERDRERVRSRERERDRDRDRESSYGQGWPDGGPSR
RHHERSSSMERERDRGRERHREHRERHR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcggagcacgtcgacatctacgacgaggagctgaaggcggaggaggaggag
gctggtgactttctttccgcggaaaacgacgctctctatgacgatgtgttgaccggttct
gtgagcagtgaggcgccactagagaagcagaaaactaaggaggataacaagccagaagta
gtctacacgtataaaggatgtacagcggataaatcgaaacgatttgcagtctacgtgggc
aacttctcctggtggacctcagacaaagatctcatatctgtggcacggacgctgggagtt
aaagatgttgtggatattaagtttgcagagaacagagctaatggtcagtctagaggtttt
gctgagatcgtggtgtccacagaggagtctgtgaagcggttaatagagacgatgccgcag
tgtcagataaacggagagaaggtcgactgtcgctccgctacacggaagaacctggctgtg
tttgaggctcaggccagaaaacgcatccctcaacgctcgaactccaaaacagattcagac
aaagcggacagtcgctcatccatttcctctccgactgacctccagctaccccctttgccc
ccagttttccccccaccaccccacataaccaaacccccctccctcctcccctcttttttc
aaccctcttcctccccccttccctccacctcacctccaggctccgccactccctcacctg
ttcccccctccttcccctcacatgcctaacacacacacaccacccccacacatccccaac
acacacaccccctcactgcacatcaaccctgccttcttccctcccgcacacgacacgcac
aacagcagcacggcgtacggccgacacagcagggagggagacatccccgctgtgctgacg
ccggagggagagtttgaggagctgatgaacagaaacagaaccatcgccagcagcgccatc
accaaagccatgtctggagccactacaggtgatgtctctatggccatagagaccctgctt
acagccattgcagtgattaagcagtctcgagtgtacagtgatgagcgctgcagagcactg
gtcgagtctctgaaagactgtctctactcaatagagagcaagtcatacggctcaaggaaa
aggcaccggtctcgagagcgagacagggagcgtgtcaggagtcgagagagggagagagac
cgggacagagacagagagagttcgtacggccagggctggccagacggcggaccatccagg
agacaccatgagcgctcgtccagcatggagagagagagggacagggggcgagagcgccat
agagagcacagagagagacaccgttag
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