Colossoma macropomum (tambaqui): 118818890
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Entry
118818890 CDS
T09004
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118818890 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118818890 (arhgef18b)
Membrane trafficking [BR:
cmao04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118818890 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PHD
C1_2
Motif
Other DBs
NCBI-GeneID:
118818890
NCBI-ProteinID:
XP_036442321
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MADSPLNNSWPSFSKLWMKRWSFKRGSECKPCTQPIRPTSSTGSSSSLSPTSIAEGFFFS
GTPEDKNYCLVESDFESSVDDLLDLNSSLKDSEYFRDLQASPSLSETPLPVLFPPTCKPQ
LRPALVLYAPPPCSPSHTQCDLTVSPTLSTMNLLCEQGEVTEPALTADSTVCADEPTAPQ
EMDLDLETLPILVRSMSTSRRHSWDVPLSPVGLGRRFSLDTTSMDSDVEREEESLARSSP
PPSLSHSQSSGEEFTTSLETESSKTLLPPTSGRTVYARSDILASEEKTRAEKVSRIVETS
KQAARAAGEENDSEEGLGSADGQCHMLMVQKVLQELKLYHGVKRITSSVDRKESSASVTW
YEFLSNENEEEEDRAERTERGTKVKRTLSSLRNRMTGSFNKDKGKTREKDQQKEKGKERD
KEKEKEKEKEKEREPKEKTRRASLISRSANGHMLVNGSFSSLATCSLCSKSLQRKHGLQC
LNCAVNVHKSCKNLLPECSNSKNKTKDFAQKTTGVVQSHNLTPRDPCFTPPHAPAADGSS
RSARCAPGMTVPSRGPSAQPAAPSSTQPLSHTSSSSSIAGEMDEVDAFRIKRYAEDAVSL
APSTADSVIVEDGYYSSVRQELDGMAQDFEVESWSLAVDQQFLKKHSKDMIKRQDVIYEL
IQTEMHHVRTLKIMLRVYVYELRETLQLDERRLDCLFPRLDSLLELHNDFLSRLKERRKE
ALQPGSERNYTIDRVADILTEQFSGERGERMKESYGAFCSRHTEAVNFYKEQLQSNKKFQ
NLIRKISHLSIVRRLGVPECILLVTQRITKYPVLVERLLQCTEAGTEEHAELSQALDLIK
DTIMKVDSQVSLYEKEMRLKEIASKIEARSLGKIKDGRIFRREDLTQGKRRLLHEGMVNW
KAASGRLKDILAVLLTDVLLLLQEKDQRYVFSAVDSKPSVISLQKLIVREVAHEEKAMFL
ICASSTEPEMYEIHTSSKEERNTWITCIRQAVDSCPHTEERLFSEEEGEARAQRFRGIQE
RLTVKDAQITQALMEKLQLFAELAESVACVEDVGSRSRLLLRGDASDLQQGEQLLKGAIT
EVENLQNLLASGVRGASPHPEENQSPGSGSGMLPKRADTFGGYDSNPPMLQKNGSVKKLS
SGSGKSRDRNQRASSDPQLKEICTGQGLEDMADTSSPSWNTIWLNSKFPEAEFFDRVLLL
AQRLYSLQSIISQQDSQIELQRASLFSAERDRPGRPRGTNVLLEQEKQRNLEKQREELAN
FQRLQAQHRQEQARWERERERQRRQAEAAEQRLQEREEECRRLEARLVEERQELERQRQT
YQQDLERLRESTRAVEKEKEKLEQQQKKLKKHNTVPSTASLYIQETGQLPGSSSFNGELL
LGNAGGDSSVQSRQPVRSSLSLAPADYLERPEVHPRRESSTPLPMKTEVPIHLISTTNQH
HKQGVVQQQIPTKLATMKCKDKSSKGKSSHRTDSSASVDIKQMLPLKLSASEGSLKVRRS
VSPHQQPQPPQTLLTDPPGLADNCPTEPPPSQTVSLLRPQSQNLTPPYAVPDETAKEDVI
FF
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgccactcaacaactcctggccttccttctccaaactctggatgaaacga
tggtccttcaaaagaggctcggagtgtaagccatgcacgcagccgatcagaccgacctcc
agcaccggctcctcttcatctctgtctccgacctccatcgctgagggattcttcttcagc
ggcaccccagaggacaagaattactgtctggttgagagtgattttgagagcagcgtggat
gacctgttggatttgaactcctctctgaaagactctgagtatttcagagatctgcaggcc
agccccagcctctctgagacccccctgcccgttttatttccccccacgtgtaaaccacag
ctccgccccgctctggtcctctacgccccaccaccctgcagcccgtcccacacacagtgc
gacctcactgtctcaccgacactcagcaccatgaacctgctgtgtgaacagggtgaggtg
actgagcctgcactcactgcagattccaccgtgtgtgcagatgaacctacagcaccacag
gagatggatttagatctagaaactttacccatattggtcaggtcgatgtccacttctcgc
aggcacagttgggacgtcccactttctccagtgggcttggggaggaggttcagtctggac
accaccagtatggacagtgatgtggagagggaagaggagagtttagctcggagctctccg
cctccctcgctgtctcactctcagagctcaggggaggagttcactacgtctctagaaaca
gagagctccaaaacattactgccacccacgtcgggcaggactgtgtacgccaggtctgac
atcctggcatcagaagaaaagacccgcgcagagaaagtctctcgcattgtggaaacttcc
aaacaggctgccagggccgcaggagaggagaacgactcagaagagggtttgggctcagca
gatgggcaatgtcacatgctgatggtacagaaagttctgcaagagcttaagctgtatcat
ggagtcaaacgcataacctcaagtgtggacaggaaagagtcatctgccagtgtcacctgg
tacgagtttctctccaacgagaatgaggaagaggaggacagggcagagaggaccgagcgg
ggcaccaaagtcaagcgcacgctgagctctctgaggaaccgcatgactggatcattcaac
aaagacaagggtaagacccgggaaaaagatcagcagaaagagaaaggcaaagagagggac
aaggagaaagagaaggagaaagagaaggagaaagagagggagccgaaggagaaaacccgc
cgcgcaagtttgattagccgcagtgctaatgggcacatgctagttaacggctcgttctcc
agcctggccacctgctcgctgtgcagcaagagcctgcagagaaagcatggcctgcagtgt
ctcaactgtgctgtgaacgtccacaaaagctgcaagaatcttctacccgagtgcagcaac
agtaagaacaagacaaaagattttgcacagaagaccactggggtcgtccagtcacataat
ctcacccccagggatccctgcttcacccctccgcacgctccggctgccgatggctccagc
cgctccgcccgctgtgctccaggtatgaccgtcccgtcccgcggacccagcgcccagccc
gccgcccccagcagcacccagccgctcagccacaccagcagctccagctctattgcaggg
gagatggatgaagtggatgcattcaggataaaacgctatgcagaggatgccgtgtctctc
gctccgtctactgcagactcggtcattgtcgaagatgggtactattccagtgttcgacag
gagctggatggaatggctcaggatttcgaggtggagtcgtggagtctggctgtggaccaa
cagtttctaaagaaacattccaaagacatgatcaagaggcaggatgttatatacgagctg
atccagacggagatgcaccacgtgcgcacccttaagataatgctgcgcgtttacgtgtac
gagctgcgtgagacgctgcagctggacgagaggaggctggactgtctgttcccgcgactg
gatagtcttctggagctacataacgacttcctgtcccgcctcaaagagcgccggaaagag
gctctacagccgggcagcgaacgcaactacaccatcgacagagtggcagatatcctcact
gaacagttttcaggggagcgcggggaacggatgaaggaaagttacggcgctttctgcagc
cgccacacagaagccgtcaacttctataaagagcaactacagagcaacaagaagttccag
aacctaataaggaaaataagccatttgtccatagtgcggcggcttggtgttccagagtgt
attctcctcgtgacgcagcgcatcaccaagtaccctgtcctcgtggagcgactgcttcag
tgcacagaagctggcactgaggagcatgcagagctgagtcaggccctggatctgattaaa
gacaccatcatgaaggtggactctcaggtcagcctctatgagaaggagatgcgcctcaag
gagatcgcctccaagatagaggccagatccctcggcaagatcaaagacggacgaatattt
cggagggaggacctcacgcagggcaaacggaggctgctgcacgagggcatggtcaactgg
aaggccgcgtctggcagactgaaggatattctagctgtgctgctcacagatgtactgttg
cttttacaagagaaggatcagagatacgtgttttctgctgtggacagcaagccgtcagtg
atctctctgcagaagctgattgtgagggaggtggctcatgaggagaaggccatgttcctc
atctgcgcctcctccactgagccggagatgtatgagatccacacgtcctccaaagaggag
cgcaacacctggatcacgtgcatccgccaggccgtggacagctgcccacacacagaggag
aggctgttcagtgaggaagaaggagaagcgagagctcagcgtttcaggggcatccaagag
cgtctgactgtgaaggatgctcagatcacgcaggctctgatggagaagctgcagttgttt
gctgagctggccgagtctgtggcctgcgtggaggacgttggttctcgctctcgcctgctg
ctccgtggagacgcgtcagacctccagcagggggagcagctgcttaagggagccattact
gaggttgagaacctgcagaacctgctggcctctggtgtgagaggagcttctccacaccct
gaggaaaaccagagcccaggctcagggtcaggcatgctgcccaaaagagcggacacgttc
gggggctacgacagtaaccctcctatgctacagaagaatggcagtgtaaagaagctctcg
agtggatcaggaaagtccagagacagaaatcagcgcgccagttctgacccccagcttaaa
gagatctgcaccggtcaggggctggaggacatggctgacacttcctctcccagctggaac
acgatctggttgaactccaagtttccagaggctgagttctttgatcgggtgctgctgctc
gctcagcgtctctacagtctacagtccatcatctcgcagcaggacagtcagattgagctt
cagagagcgtctctgttctcagcggagcgggaccggcctggccggccgcgcggcaccaac
gttctgctggagcaggagaagcagaggaacctggagaaacaacgcgaggagctggccaac
ttccagcgtctgcaggcgcagcaccgccaggagcaggcgaggtgggagcgcgaacgcgag
cggcagcggcggcaggccgaggcggctgagcagaggctgcaggagagagaggaggagtgc
aggaggctggaggctcggctggtggaggagaggcaggagctggagaggcagaggcagacc
taccagcaggacctggagaggctgagggagtccacgcgagctgtggagaaggagaaggag
aagctggagcagcagcagaagaagctgaaaaagcacaacacggtgcccagcaccgcttca
ctgtacatccaggagacgggacagctcccaggctcctccagttttaacggcgagctcctg
ctgggcaacgccggcggagactcgagtgttcagtctcggcagccggtccgctccagcctg
tcgttggcccccgccgattacctggagaggccggaggttcatccccgcagagagagcagc
acacccctgcccatgaagaccgaggtgcccatccacctcatcagcaccaccaaccagcac
cacaaacagggagtcgttcagcagcaaatccccaccaaactcgccaccatgaagtgcaag
gacaagagcagcaagggcaaaagctcgcaccgcacggacagctcagcttcagtagatatt
aagcagatgcttcctctgaagctctcagccagcgagggctcactgaaggtccgtcgctcc
gtcagcccccaccagcagcctcagcctccgcagactctgctcacagatccccctggcctg
gcagacaactgccccactgagccaccgcccagccaaacagtcagtctgctgcggcctcag
agccagaatctgacccctccatacgccgtccccgatgagaccgccaaggaggacgtcata
ttcttctga
DBGET
integrated database retrieval system
