Colossoma macropomum (tambaqui): 118818930
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Entry
118818930 CDS
T09004
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118818930 (ctr9)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
118818930 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
118818930
NCBI-ProteinID:
XP_036442373
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLRARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALASSEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQDQERELLRQQMQREQEEKKVKEAEEQKKLQEQRAQFVEKTKNLLSFTEEVKESAK
EKKKGGGGRRKKGADYDDFVNDDSDEDLPVKKKKKKKPRSGSEQEEEGEEGEKKPRKKRR
RPAKGGDEESDEEGGSRPKKQRKPRERKRIEKPKPERMPPSLKGKIKSKAIISSSESSSD
EDGLKIAEDRNPQDSGSGSDDGGHRKRIASDSESDGERNRSGSEGGSPRRSANSDEDESG
SERPVKRKRPRPQSDSEQSDNESKRSRSEGSEDESRPASPAAVSDQGSDNEGSPQRSDNE
SEPEGSNNEASNRGSDDESD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccatcgaaatccccctgagggacacggatgaggttattgagcttgat
tttgatcagcttcctgaaggagatgaagtcatcagtatccttaaacaggagcacacacag
ttgcacatatggattgcacttgctctggagtactacaaacaggggaagacggaggacttc
gtgaagctgctggaagcagctcgcatcgacggaaacctcgactacagagaccatgagaaa
gaccagatgacctgtctggacactttagccgcttactatgtgcaacaggcacgcaaagag
aagaacaaagatgcaaagaaggacctcatcaaccagtccacccttctgtacaccatggca
gacaagatcatcatgtatgatcagaaccacttgctggggagagcctgcttttgcctgtta
gaaggggataaaatggatcaggcagatgcccagtttcattttgtcttgaaccagtccaca
aacaacatccctgcactgttgggtaaggcttgcatttccttcaacaaaaaagattacaga
ggagctttggcctactataaaaaagcgctacgcacaaacccaggttgtccagctgaagtg
aggcttggaatgggccactgctttgtgaagctcaacaaactggagaaagctcgtctggct
ttcagccgtgccctagagctcaactcgaagtgtgtgggggctctggtgggtctggctgtc
ctagagctcaacaacaaagaggctgactccatcaagaatggagtgcagctgctctctaga
gcatacaccattgaccccagcaaccccatggtgctcaatcaccttgcaaaccactttttc
ttcaaaaaggactatagcaaagtacagcacttggctcttcatgcatttcacaacactgag
gtagaggccatgcaagcagaaagctgttatcagttagcccgctctttccatgttcaggag
gactacgaccaggcttttcagtactactaccaggccacccagtttgcctcttccaccttc
gtcttgccattcttcggcctgggccagatgtatgtgtatcgcagagacaaagaaaacgca
gctcagtgctttgagaaggtcttgaaggcttaccccaataactacgaaaccatgaaaatc
ctcgggtccctttatgccgcctcagatgatcaggagaaaagagacattgccaaaggccat
ctgaagaaagtcactgagcagtatcctgatgatgtagaagcttggattgagctcgcacag
attcttgaacagacagacattcagggtgctctgtctgcatatggcacagccacaagaatc
ctccaggagaaggtgcaagctgatgtgcctcctgagatcctcaacaatctgggggctttg
cacttcagactggggaatcttggggaagcaaagaaatacttcttggcttctctggagagg
gccaaagctgagggcgaacatgacgagcactactataatgccatttccgtcaccacatct
tacaacctggcccgactctatgaggcaatgtgtgagttccacgaggctgagaagctatat
aagaacatcctgagggaacatcctaactacgtggactgttacttgcgtcttggagccatg
gcccgtgacaaaggcaacttctatgaagcctcagactggttcaaagaagctcttcagatc
aaccaggatcacccggatgcttggtccctgattggaaatctccacttggccaagcaggag
tggggtccaggccagaagaagtttgaacgcatcctgaagcagccgtccactcagaacgat
acctattccatgctggcgctgggcaatgtttggcttcagacgctgcaccagcccacaagg
gatcgggaaaaggaaaagagacatcaggatagagctctagcgatttataagcaggtcctg
aggaatgattccaagaatctatatgctgccaatggcataggggctgttttggcccacaag
ggctatttccgtgaggcacgtgatgtattcgcccaagtcagggaggcaactgctgatatc
agtgatgtctggctgaacttggcacacatttacgtggagcagaaacagtacatcagtgct
gtgcagatgtacgagaactgcctgaagaagttctataagtaccagaacacagaagtgtta
ctttatctcgcgcgagcgctctttaagtgtggaaagctgcaggagtgtaaacagatgttg
ctgagggctcgccatgtggcccccagcgacacggtgttgatgttcaacgtggctctagtg
ctgcagaggttggccacactggtgttgaaggatgagaagagcaacctgaaagctgtgctg
agtgcggtgaaggagctggagctggcccacaggtacttcagctatctcagtaaggcagga
gacaagatgaggttcgacctagcacttgcatcgagtgaagcaaggcagtgctctgacttg
ctaagccaggcacagtaccatgtggctcgggcccgtaagcaggacgaggaagagaaggag
ctgcgggcaaagcaggaccaggagcgggaattactgaggcagcagatgcagcgtgaacag
gaggagaagaaggtcaaagaggccgaggagcagaagaagctgcaggagcagagagctcag
tttgtggagaagaccaagaacctcctctccttcactgaagaagtaaaagagtctgcaaaa
gagaagaagaagggaggcggtgggcggcgcaagaaaggagcagactatgatgactttgtt
aacgatgactctgatgaagatctgcctgtgaagaagaagaaaaagaagaagcctcgcagt
ggcagcgaacaggaggaagaaggcgaagagggtgagaagaaaccacgcaagaaaaggagg
agaccagctaagggtggagatgaggagagtgatgaggaaggaggctcaagacctaagaaa
cagcgtaaacccagagagcgcaagaggattgagaagcccaaacctgagcgcatgccaccg
tctcttaaagggaagatcaaatctaaagctattatttcctcctcggagtcctcgtctgat
gaggatggcctgaaaatcgcagaggataggaacccacaggacagtggttccggctcggac
gacggaggccaccggaagcgcatcgcttccgacagcgagtcggacggagagcgaaaccgt
tcgggcagcgagggcggcagcccccggcgctctgcaaactctgatgaagacgagtccggc
agcgagcggccagtgaagaggaagagaccacggccgcagtcagactcggagcagtcggac
aacgagagcaagaggagccggtcagagggatcagaggacgagtctcggcctgcgtctcca
gcagcagtgtcggatcagggctcggacaacgagggatcaccgcagcggtcagacaacgag
tccgaacctgagggatccaacaacgaggcctccaatcgaggctctgatgatgaaagtgac
taa
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integrated database retrieval system
