Colossoma macropomum (tambaqui): 118818937
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Entry
118818937 CDS
T09004
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118818937 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118818937 (rubcn)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Other autophagy associated proteins
Others
118818937 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
118818937
NCBI-ProteinID:
XP_036442387
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MEIQTEADVAERRREHWKLLSNLKTTVEGLLSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KHEQVYYKQKDYWQFVWCLRFISPSLARHVEQFSQLEPVLSSGVYGVGGEGYKAERWLLH
SLQNHLLSSQLRPLLTHITNTRKYYSDEAFLLSEPHVSAMLQCLEAVEQNDPRLLALIDT
VRIRELSRLKEPVPLGLVKSHSLYLLPPERPLAAVRRHTSHSSLTESNKTYSQTQTDSEV
VARSSSMRVEGKVGAPCGCDRDDVGTGVPQVCVSEPPNPPQPEQAESVDGDGDDGPEYLA
IGNLGRRRHSSSSAHSSETPPVPTRSAPAPPQPPRRSSFSDTQRGTGRSFRVHTRSLSDT
GVAQKHKQESAVDEPSVKSFGPFSPQSSSSSSSSSHSSLYMEANGFQYSTVSDGMFRKPS
EGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNMCRRAEEAEEEGDSDSE
IQQLKQKIRLRRQQIRRSRLQPSSSQHAFTSTDSGSPKSSHGSFPHSDSGSAEEVEDFEL
RDGCDGPALLASQSGLSLSLASLFSDADIKPSVTPSRSFISSESVSPSLLQSNSAESVAM
GLLRQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNL
EWAPPRPQIIFNIHPAPKRKVVVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCH
ENAVAVVPGRVLRKWDFSKYYVSNFARDLLGKISGDPLFNPNDINTALYKKVKALETVRV
LRVQLFHMKNLFKTCRLAKDVLDEFDSVPGHLTEDLHLFSLNDLTAVRSGELAPKLRELL
RSGSAHVSGCMLCQAKGFVCEFCGNDKDIIFPYELNKCQRCEECNACYHKTCFKSGRDCP
RCQRLAERRERMARKNMEEDEEEEDEGGT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagactgaggcagacgtcgcggagcgaaggcgtgaacactggaagcttttg
tccaatctgaagaccaccgtggaggggcttctgtccaccaataacccgaacgtgtggtcg
cggtatggaggactgcagcgactccacaaggacatgaacaacatcctgagccacggcctc
aaacacgaacaggtgtattataaacagaaggattattggcagtttgtttggtgtctgcgg
tttatcagcccgagcctcgcgcgtcacgtggagcagttcagtcagttggagccggtattg
agcagtggtgtttatggtgtcggtggtgagggctataaagccgagcgttggctcctccac
agcctgcagaatcacctgctgtccagccagctcagacccctactcacccacatcaccaac
acccgcaaatactacagcgatgaagcgttcctgctgagcgagccgcatgtgtctgccatg
ctgcagtgtttagaggccgtagagcagaacgacccccgactgctggcgctcatcgacacc
gtccggatcagagagctgtcccggctgaaggaaccggttcctctcggtctggtgaagagt
cacagcttgtacctgctgcctccagagcgccccctggcagctgtccgcagacacacatcc
cactcctccctcacagagagcaataagacctactcacaaactcagacggactctgaggtc
gtggcacgcagcagttcgatgagggtggaaggtaaggtgggcgctccgtgtgggtgtgac
cgtgatgatgtcggcacaggggtcccgcaggtgtgtgtgagtgagccccccaaccctccc
caaccagagcaggcggagagtgtggatggagacggtgacgatgggccagagtacctcgcc
atcggcaacttggggaggcggagacactccagcagctccgcccacagcagcgagactcct
ccggtgcccactcgctctgcccccgcccctccgcagcccccccgccgcagctccttctcc
gacacacagcggggaacggggcggagcttcagggttcatacgaggtcactgtctgacact
ggggtggcacagaaacataaacaagaatctgcggtggatgagccgagtgtgaagagtttc
ggcccgttctctcctcagagcagcagcagcagcagcagcagcagccacagctcgctctac
atggaggccaatggttttcagtacagcactgtttctgatggaatgttccggaagccgtcg
gagggccagagtctgatcagttatctctcggagcaggacttcggcagctgtgctgatctg
gagaaggagaacgctcacttcagcatttcagagtctctaatcgctgcgatcgagctgatg
aagtgtaacatgtgccggagagcggaggaggcggaggaggagggagacagcgactctgag
atccagcagctgaagcagaagatccgcctgcgcagacagcagatccgccgcagccgactg
cagcccagtagctctcagcacgcgttcacctccacagacagcggctcaccgaagagttcc
catggttcctttccccactctgactccggatcagcggaggaggtggaggacttcgagctg
agagatggctgtgacggtccggcgctgctggcgtctcagagcggactctcactgtccctc
gcttcactcttctcagatgcagatattaaacccagcgtgactcccagcaggtccttcatc
agctccgagtctgtttctccatctctcctgcagtcgaactccgccgagtcggtggcgatg
gggctgctgaggcagtttgaggggatgcagctcccggcagcttcagagctggactggctg
gttccagaacacgacgctccgcagaagctcctgccgattcctgactccctcccaatctct
cctgatgatggagagcatgcggatatctataagctgcggatccgggtgcgggggaatctg
gaatgggctccgccgcgaccgcagatcatctttaacatccacccggcgccaaagaggaag
gtggtggtggctaaacagaactacaggtgtgcaggctgcggtacacgtatcgatccagat
tatataaagcggttgcggtactgcgagtatctgggccggtatttctgtcagtgttgtcat
gagaacgcggttgccgtggtgccgggccgcgtgctcaggaaatgggatttcagtaaatat
tacgtcagtaacttcgcccgagacctgctggggaagatctcaggagacccgctcttcaac
cccaatgacatcaacacagcgctctacaagaaggtcaaagcactggagacagtgcgggtt
ctaagagtccagctgttccacatgaagaacctctttaagacctgccgtttagctaaagat
gtgctggatgagtttgattcggttccgggtcacctgacagaggatctgcacctgttctct
ttgaatgacctcaccgccgtccgctccggagaacttgccccgaaactccgcgagctgctc
cgctcaggctccgcccacgtctcaggctgcatgctctgccaggcgaagggctttgtgtgt
gaattctgtggtaacgacaaagacattatcttcccctacgagctgaacaagtgccagcgg
tgtgaagagtgtaacgcctgctaccacaagacgtgctttaaaagcggtcgcgactgcccg
cggtgccaacggctcgccgagaggagagagaggatggcccgcaaaaacatggaggaggac
gaggaggaagaggacgaaggggggacgtag
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