Colossoma macropomum (tambaqui): 118818981
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Entry
118818981 CDS
T09004
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118818981 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118818981 (vcam1b)
04090 CD molecules [BR:
cmao04090
]
118818981 (vcam1b)
04091 Lectins [BR:
cmao04091
]
118818981 (vcam1b)
Cell adhesion molecules [BR:
cmao04515
]
Immunoglobulin superfamily
VCAM
118818981 (vcam1b)
CD molecules [BR:
cmao04090
]
Proteins
118818981 (vcam1b)
Lectins [BR:
cmao04091
]
I-type lectins (Siglecs)
118818981 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C1-set
ICAM1_3_5_D2
C2-set
ICAM_N
Motif
Other DBs
NCBI-GeneID:
118818981
NCBI-ProteinID:
XP_036442454
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MFPALSVTLTVLLPLAAALQMNLSPKKVLYKVGDREEIKCSMNECPEEVKFSWGSLGDKP
LYADYKTSPKESVLIFSSVTKDHENIIKCTAKCKEVSKQATATVKVYSFAKDPVISGHDS
LVLGVKSTLTCEVTDVYPAEYMEVEWLRGDTVMHTQEGQPDTQTIRSDYTFTPQRQDDGE
QITCRASLMLPDIPPDQSTRETTISLTILSAPSNVRGSGSTTVPAGSALSLTCDADGSPE
PVFSWNVLRPDGQRVRVGETRELSLPNVTLSDAGDYECEASNRIGKKTATVTVTIHGPPT
NTVISVSPDEPKEDESVTISCVSSSVTESHLVLSKLLDGAETELASDEGPRISLSYSSAS
INDSGLYVCKAFNDYGSQEASVQLLVQAHPLEVTLQPDLSVITVERGSVLSLSCEASGCP
HPHFTWKGLEDKPRYRSSDTQTAVSQLNLGPVGPKEDGAFICEVKCGSVVKSKRTEVKIF
SFPSHPAVESSGTSLEGEMTNLTCTVHDVFPADRFRTQWLDGETELFSQTWSFANGLQTL
SSVFSYQPNGSDHDKNISCKVSLEMDGVPAELAEKTASITLAMHYAPRQTTITVSPQKEL
KEGENISISCLTDSAPEGHVVLRKVLDGEEIEVASSEGTQTFFTIHSAELSDSGDYVCEA
VNQYGSHRASTQISVQAPPRNTTVKVLPSTSVQEGQNITICCHSVSFPPPAIILRKLDSG
IDIYSPNGTFTLINLTPNDTGLYQINVTNALGYETEVFSIHVMERLSSPPPSWNIFITPF
LGLGLLTSAAVVLEYLRRARLKGFYELSKCQPGTV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagctctaagtgtgactctgactgttcttctgccacttgcagctgctttgcag
atgaacctcagtccgaagaaggtgctgtacaaagttggagacagagaggaaattaagtgt
agcatgaatgaatgtccagaggaggtgaaattctcctggggttcactgggcgacaaacct
ctctatgctgactataaaacatccccaaaggaatcagttctgatcttcagcagcgtgacc
aaagaccacgaaaacataattaaatgtacagcgaagtgcaaagaagtgtccaaacaggcg
acagcgacagtgaaagtgtactctttcgcaaaggacccagtcatctcagggcacgacagc
ttagtgttaggagtgaagagcacgttgacctgtgaggtcactgatgtctatccagcagag
tatatggaagtggaatggctgcggggagacactgtcatgcacacacaggagggccagcct
gacactcagactattcggtccgattacactttcacaccacagagacaggatgatggagag
cagataacctgccgggcctcactcatgctaccagacataccaccagatcagagtaccaga
gagaccaccatatccttgactatactgtctgcaccaagcaatgtgagagggtctgggtca
accacagttccagctggctctgctctctctctgacctgtgacgcggacggcagtccggag
ccagtgttttcttggaacgttctcaggcctgatggtcagagggttagagtaggagagacg
cgggagctttcccttcctaacgtgactctgtcagatgcaggggactatgagtgtgaggcc
agcaacaggattgggaaaaagacagccacagtgaccgttaccattcacggtcctccaaca
aacactgtgatatctgtgtcccctgatgagccaaaggaagacgagtctgtgaccatctcc
tgcgtgagcagcagtgttacagagagccatctggtcctgagtaagctgctggatggagca
gagactgagctggcgtctgatgaagggcctcgaatctccctctcttacagctctgccagc
atcaatgactcaggcctctacgtctgcaaggctttcaatgattacggcagccaggaggcc
agtgtccagcttcttgttcaagctcatcctctggaggtgaccctgcagccagacctgagc
gtgatcacagtagagcgagggtcagtcctgtcactgtcctgtgaggcctcaggctgtcct
cacccacacttcacgtggaagggtctggaagataagccacgatacagaagcagtgacact
cagacggccgtatcccagctaaacttggggcctgtggggccgaaagaggatggggctttt
atctgtgaagtcaagtgtggctctgtggtgaagtccaaacgcaccgaggtgaaaattttc
tccttcccctcacatcctgccgttgaaagctctggaacttctctggagggtgagatgacc
aatttgacctgcacggtccatgacgtgttccctgctgaccgtttccgtacgcagtggctg
gacggagagacggaactgttttcacagacatggtcttttgctaatggactgcagaccctt
agctcagtcttctcctaccaacctaacgggagtgaccatgataagaacattagctgtaag
gtttcactggagatggatggagtgcctgctgagctagcggagaagacggcatctatcacc
ttggcaatgcactatgccccacgacagaccaccatcaccgtgagcccgcagaaggagctg
aaggaaggggagaacatcagcatctcctgcctgaccgacagtgctccagagggacatgtg
gttttgaggaaagtgctggacggtgaagagatagaagtcgcatccagtgagggaacgcaa
accttcttcacaatccactctgctgagctgtctgactctggagactatgtgtgcgaggct
gtcaatcaatacggaagtcatagagccagcacccagattagtgtacaagcacctcccaga
aacactacagtgaaggtgttaccatccacatcggtgcaggagggccaaaacatcaccatt
tgctgccactcggtcagcttccccccacctgctatcattctcaggaagctggacagtggg
atagatatctactcccccaatggcacctttacactgatcaacctcacacccaacgacaca
ggtctctaccagatcaatgtcaccaacgccctgggctacgagactgaggtcttcagcatt
catgtaatggagagactctccagtcctccacccagttggaacatctttattactccattc
cttggtctgggactgttgacctccgcagccgtcgtgctggagtatctaaggagagcgcgg
ctcaagggcttctacgagctgagcaagtgccaaccaggcactgtgtag
DBGET
integrated database retrieval system
