Colossoma macropomum (tambaqui): 118819017
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Entry
118819017 CDS
T09004
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118819017 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmao03009
]
118819017 (efl1)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
Pre-60S particles
GTPases
118819017 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118819017
NCBI-ProteinID:
XP_036442505
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MGHTSLEKLIRLQKKTSNIRNICILAHVDHGKTTLADCLVASNGIISTRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYTAGESEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIIELKLSPQEAYTHLQKILEQVNAVTGTL
FTSKVLEERAVKEAEVQEAVSEPSGGELVYDWSAGLEETDDSHLYFSPDQGNVVFASAID
SWGFSIHQFAQIYCQKMGIRSEVLQKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQLVLD
NIWSLYDAVVTRRDKEKVEKMVASLGLKVMARDLRHSDPKVLLSAICSQWLPVSQAVLSM
VCEKLPSPSEISAERVERLMSVGTRRFDSLPDKTQQLKQAFLECASEETAPVIVFVSKMF
AVDSKALPQNRQRPLTQEEIAQRREMARQRHAEKQAASQSAENPESANAGGAQTVTSANS
TNTDTDALCAQTEALTVKPTAEEEEKEHFIAFARIYSGVVRRGQRVFVLGPKYDPALALR
TLPDGCSAADPLPSVPHLACCTLEHLYLLMGRELEELEEVPVGNVLGIGGMEEFILKSAT
VSTSPACSPFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEH
VLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVNEELGRQQKVAV
IHQAKDEQSKYPEGVQVDSTGLVTLTTPNKMATVGIRAIPLPEEVTRLLEGNSELIRTME
QFSLFAREGKTLEISQKTLEEIQGFRSKLEGLLQGRKWRNAVERIWAFGPRRCGPNILLN
NVEGYKRPSVWQCLEREKEKSEAVMLRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVES
WEIKFSSQLTQQDSVEEDSVSQQALEADNSASAPASGESELGGANAVEDTPSSGSSQSRR
KGDTTDCYGPFSGQLIAAMKEACRYAFQAKPQRLMAAMYTCEIMATADVLGRVYGVLSKR
EGRVLNEEMKEGTDMFIIRAVLPVAESFGFADEMRKRTSGLASPQLVFSHWEVISSDPFW
VPTTEEEYLHFGEKADSANQALKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggggcacacgagtctagaaaaactcattaggctgcaaaagaaaacttcaaacataaga
aatatatgtattctggctcatgttgaccatggaaaaacaacactggcagactgtttggtt
gcaagcaatggcatcatttccactcgcttagcagggaagctgaggtacctggacagtcgg
gaggatgaacagatccgagggattaccatgaagtccagtgccatttcattacactatacg
gcaggggaaagtgaatacctcattaatctgatcgactctcctggccatgtggatttctcc
tctgaagtgtccacagcggtgcggctgtgtgacggagctatcgtggtggtggacgcagtc
gaaggagtttgtcctcagactcaggcagtgctgcggcaggcgtggctggagaacatccga
cccgtgctcgtcatcaataagatcgatcggctaatcatagagctgaagctcagtccgcag
gaggcctacacgcaccttcagaaaattctggaacaggtgaacgctgttacgggcacttta
ttcacctccaaagttctggaggagcgggcagtgaaggaggcggaggtacaggaggccgtt
tcggagcccagcggaggagagctggtttatgactggagcgcaggccttgaggagacggac
gattcacacctatacttcagcccggatcagggaaacgtggtgttcgccagcgccatcgac
agctggggcttcagcatccatcagtttgcgcagatctactgtcagaagatgggcattcgc
tctgaagttttacagaagaccctgtggggggatttctaccttaatgccaaagccaagaag
atcatgaaaggagcacagtcaaaaggaaagaagcctctgtttgtccagctggtcctggat
aatatctggagtttatatgatgctgtggtcactagaagagacaaagaaaaagtggagaag
atggtggcgtctttgggcttaaaagtgatggcacgtgacctacgacactcggaccccaaa
gtgctcctgagcgccatctgcagccagtggctgccagtctcgcaagcagtgctgtcgatg
gtgtgcgagaaactgccatctccatctgaaatcagtgctgagagggtggagaggctgatg
agtgtcggcacacgcaggttcgactcactgcctgataaaacacaacaactcaaacaagcg
ttcttggagtgcgcgagtgaagaaacagctccagtcatagtatttgtgtcaaagatgttc
gctgtggactccaaggccctccctcagaacagacagaggcctttgactcaggaggagatc
gcccagcgccgggagatggccagacagagacatgcagagaaacaagcggccagtcagagc
gcagaaaaccctgagtcagccaacgctgggggcgctcagactgtgacttcagccaacagc
accaacacagatactgatgcactgtgtgcacaaacagaagctctgacggtgaagcccaca
gcagaagaggaggagaaggagcacttcatagcgttcgcacgcatctacagtggcgtagtc
cgcaggggccaaagagtatttgtgcttggacccaaatacgaccctgcgcttgccctcaga
acgctgcctgacggatgttctgcggccgaccctttgccctccgtgccccatttggcctgc
tgcacgctggagcatctgtacctgctgatgggtcgtgagctggaggagcttgaggaggtt
cctgtgggaaatgttctaggaattggaggaatggaagagtttatcctgaaatcagccacc
gtctctacgtccccggcctgctcccccttcactccactcaacttcgaggccacgcccatc
gtccgggtcgccatcgaacccaaacatcccagtgagatgccgaagctggtgcgggggatg
cggctgctgaaccaggctgacccgtgtgcagaggttctgatccaggagactggagagcat
gtgctggtgacggcgggagaagttcacctgcagcgctgtctggatgacctcagagagaga
tttgccaaaatcgagatcagcgcctccaagcctatcattccattccgtgagacagtcatc
cgaccacccaaagtggacatggtgaatgaggaactgggccggcagcagaaggtggcagtt
atccaccaggccaaagatgagcagtcaaagtaccctgagggagtccaggtggattctact
ggcctggtcaccctcacaactccaaacaaaatggccacagttggaattcgggccattccg
cttccagaggaagtgaccaggctgctggaggggaactctgagctgatccggacgatggag
cagttcagtctgtttgctcgagaaggaaagaccctggagatcagccagaagacgctggag
gagatccagggcttcaggtctaagctagagggtctcctgcagggtcgcaagtggaggaac
gccgtggagcggatttgggctttcgggccgcgccgctgtgggccaaatattctcctgaac
aatgtggaaggatacaagaggccatcagtgtggcagtgcttggagcgagagaaggagaaa
tcagaggccgtcatgcttcgagactttgacaacagcatcgttagtggtttccagctagct
acgctttctggcccgatgtgcgaggagcctctgatgggcgtctgcttctcagtggagagc
tgggagattaagttttcctctcaattaacccaacaggactctgtggaggaggactctgtt
tcccagcaggctttggaggcagacaacagtgcgagtgccccagcaagtggagaatctgaa
cttggaggagcgaatgcagtagaagacactccgtcatctggaagcagtcagagcagacgg
aaaggagacacaactgactgctatggaccgttctctggtcagctcatcgcagccatgaag
gaagcctgcagatatgccttccaggccaaaccacagcggctgatggctgccatgtacacc
tgcgagataatggccactgctgatgtcttaggtcgtgtgtatggcgttctctctaaacgc
gagggccgtgttctgaatgaagagatgaaggagggaacggacatgttcatcatccgagcc
gtgctgcctgtagccgaaagctttgggttcgcagatgagatgaggaagaggacaagcggc
ctggccagtccacagctggtcttcagccactgggaggtaatctccagcgatccattctgg
gtccccaccacagaagaagagtatctgcacttcggagaaaaggccgattcagccaatcag
gcgctgaagtacatgaatgctgttcggaagcgcaaaggactctacgtggaggagaagatt
gtggaacatgcagagaaacagcgaactcttagcaagaacaaataa
DBGET
integrated database retrieval system
