KEGG   Colossoma macropomum (tambaqui): 118819051
Entry
118819051         CDS       T09004                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118819051
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118819051
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH RuvA_C
Other DBs
NCBI-GeneID: 118819051
NCBI-ProteinID: XP_036442561
LinkDB
Position
Unknown
AA seq 611 aa
MSHYTMHHPTIEYQMKLEFFRKLGYSLQEVQAALQKLGLGTDTNAVLGELVRVGARASPT
ASQDSDEGGFSMAQLGGLSSRKKESHRDPRHSAQEDMAEPDNDLKPIVIDGSNVAMSHGN
KEVFSCRGIQLAVNFFLERGHRNITVFVPSWRKEQPRPDVPISDQHILGELERKKIVVFT
PSRRVGGKRVVCYDDRFIVKLAHEVDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSFVN
DKFMPPDDPLGRHGPNLDDFLRKKPPLPDPKRQLCPYGKKCTYGIKCKFYHPERTNQSQR
SLADELRDNARLSSSVHSCPENGRGVEASLRGSYHCEPGFGSYFPSLEQELENKLTLDPK
GSLLRSQFSDGMLPYWDDLNSYKNHASNPVSHTPLNWHNLQCPFLPKPSPSGFSSDSGLG
SYESQLSEVSRSLEDPHRVSSRHPGPSYDQQDSSLLCSCSSDSAGRGGHHQFCPLAQDPA
NFFGYVTAPYARPSPVHHYSLPTYVQPDRLQPSHPCQKRWPDQTTRPTLSLPNPLHTAGL
HGPAEVYGSNQTGVSPQTVSFEAEREEVRKKLYAIFNPYHVDKVMGMFPKLKDAQQLAAK
IVRLKSRGDLL
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtcacactacacaatgcatcatcccaccatagagtaccagatgaaactggaattcttc
cgtaagctgggctactctctgcaggaggtgcaagcagctctgcaaaagctgggcttggga
acagacacaaatgcagtgttgggagagctggtccgtgttggagccagggcctcacccaca
gccagtcaggacagtgatgaagggggctttagcatggcccagttgggaggactttcttcc
aggaagaaggagagtcatcgggaccctcggcactcagcacaggaggatatggctgaacca
gacaatgacctgaaacccattgtcatcgatggaagcaacgtggccatgagtcatgggaac
aaggaagttttttcgtgccgaggaatccagctggcagtcaacttcttccttgagagagga
cacaggaacatcactgtgtttgtgccctcgtggcgaaaagagcagcccaggcctgatgtc
cctatttcagatcagcacattctgggagagctggagaggaagaagatagttgtattcact
ccctcacgacgggtaggaggcaagagagtggtctgctatgatgatcgcttcattgttaaa
cttgctcatgaagtggatggaatcattgtgtccaatgacacataccgtgatcttcagagt
gaacggcctgaatggaagcgctgcattgaggagcggctgctcatgtactcttttgtcaat
gacaagttcatgccaccagatgacccgcttggtcgtcatggcccaaacttagatgatttc
ctcagaaagaaacctccattaccagatcccaaacgccagctctgcccttatggaaaaaaa
tgcacatatggaatcaaatgtaagttctaccaccctgaacgcaccaaccagtcccagcgt
tctctggcagatgagctgagggacaatgctcgactatccagttcagtccactcctgtcca
gagaatgggcgaggagtagaggcttctctcagagggtcctaccactgtgaacctggcttt
ggctcttactttccttctctggagcaggagctggaaaataagctgaccctggaccccaag
ggctctcttctgcggagccagttcagtgatggcatgctgccttactgggatgacctgaac
tcttacaagaaccatgcctctaacccagttagccacacacccctgaactggcataatttg
caatgtccattccttcctaaaccttctccttctgggtttagctcagactctggtcttggc
tcctatgaaagtcagttatcggaggtatcacgaagcctggaagacccgcacagagtcagt
tccagacaccctggaccctcttatgaccagcaggactcttctcttctctgcagttgctct
tctgattcagctggacgaggagggcaccaccaattttgccctcttgcccaggatccagct
aacttctttggctatgtcacagcaccctacgcaaggcccagccccgtccaccactacagc
ctgcccacctatgtccaaccagacaggcttcagcccagccacccatgccagaagagatgg
cctgatcagactaccagacccactttgagcttaccaaaccctctccacactgctggcctc
cacggacctgctgaggtgtatggaagcaaccagactggagtcagtcctcagacggtctcc
ttcgaggctgagcgagaagaagtcaggaagaaactgtatgccattttcaacccatatcat
gtggacaaagtcatgggaatgtttccaaagctgaaagatgcccagcaacttgcagcaaaa
attgtcaggctaaagtccagaggagatttgttgtaa

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