Colossoma macropomum (tambaqui): 118819115
Help
Entry
118819115 CDS
T09004
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118819115 (pcdh17)
Cell adhesion molecules [BR:
cmao04515
]
Cadherins
Protocadherins
118819115 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
PepSY
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
118819115
NCBI-ProteinID:
XP_036442658
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MYHSIFPFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAGLELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCKRNPRCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPPGTVLIDLNATDPDEGSNGQVTYAFSCYVPDRIKELFSIDPRTGVIKIQGKID
YEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFRLEENSDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVSPVVELIIKVTDHGKPTLSAMAKLVVKAYSG
PLPEGEPRINAEQRSWDMSLPLIVTLSIISVMLLAAMIAIAVKCKRENKEIRTYNCRIAE
YSHPQLGKSKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPSANNLSVPQGHVGCHTSFTGPVTSTTETPVNRMSIIQTDSFPAEPNYMGS
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCVNCTDECRVLGHSDRCWMPQFPAAGGGGAGVPQAEGSDYRTNLFVPAGMEAV
AVEPETYETVGNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASCSP
TKGCNSGSPCSSAKGVADGAEGKPSTSHYGVPDGQYASPNKQSREQGYSDPVAKVLAEAR
SRISQETAAEMQDCTLEQGGVELGRSGAMDADQVVRDIDKLLQDCRGNEATSVRK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtatcactccattttccctttcctgctcttatgggcgcaagccctgacgttgaaaaac
ctgaactactccataccggaggagaagatccagggcgtgattgggaacattgccaaggat
gcggggcttgagctcggggagcagggcaaaaagtccaacttcagggtgctggagaactcg
gcgccgcacctcattgacgtggaccctgagagcgggctgctttacaccaagcagaggatt
gacagggaaacactttgcaagcggaaccccaggtgccagctctcgatggaggtgttcgcc
aatgacaaggaaatctgcatgattaaggtggagatacaggacatcaatgacaacgcaccc
agcttcccttcggaccagattgatattgacatttccgagaatgcggccccaggcacccgt
ttcccccttgctgccgcgtacgatcccgacactcgggaaaacggccttaaaacatatcaa
atcacacgagatgactacagcatattttctttggatgtgaaatccagaggagatggtact
aaattccctgagttagttgttcagaggtccttagacagagaggaacgcagccaccatacc
cttatcatcactgccacagatggaggagaatatcccaagtcaggcacaatgcagattaat
gtgaaggtaactgattcaaatgacaatagccccgtgtttgaacagccctcttatgtcgtg
gagatcccagagaactctccacctggtacagtattgatagatttaaatgcgactgaccct
gatgagggaagcaatgggcaggttacctatgctttcagctgctatgtcccagacaggatc
aaagagttgttctcaatagaccccagaacgggtgtcataaaaattcagggaaaaatcgac
tacgaggaaaacccaattatagagattgatgtgcaggcaaaggatcaaggtccaaaccca
attcctggccattgtaaagtcactgttaaggtgcttgataggaatgacaactggccatca
ataggctttgtggcggtgcggcagggggcagttagtgaagcagcaaccccagggactgtt
attgctctggtgcgagtcacagacaaggactcgggccgcaatgggcagcttcagtgtagg
atcttaggcaacgtccctttcaggctggaggagaattctgataacttttacacagtggtc
acagacagaccgctagatagagaggtaaaggatgaatacaacattaccattgtggccaaa
gacaatggtaaccctccactaaactctaccaagtctttcacagtcaagattttagacgag
aatgataacgcgccccgcttcacaaaaatggtgtacctccttcaggtgccagagaacaac
atcccaggggaatacttaggatcagttttggcccatgacccagatttgggccaaaatggc
actgtctcctattcgctgcttccttctaatgtgagtgaggagtccataaccacgtacgtc
aacattaaaccaactgacggagccatttatgccctgagaagtttcaactatgagcagacc
aaatattttgattttaaagtccaagcaaaggattcaggtaaccctcacctggagagcaac
accacagtgcgtgtgagtgtgctggatgtcaacgacaacatccctgtcatcgtcctgcca
ctgctgcagaatgacacggcagagatccatgtcccacggaacgtgggtgtgggccacatc
atcaccacggtgagagccgtggacaatgactttggcgaaagcggccgtctcacctacgag
atctcggatggcaatgaggaacacctgtttgagatagactcggtgaccggcgaggtgcgg
acggctcagccgctgtgggaggaagtgtcgcctgtggtggaactcatcatcaaagtgaca
gaccacggcaagcccacgctctctgccatggccaagcttgtggtgaaggcctactcgggc
cctctgccggagggcgagccacggatcaacgctgagcagcgcagctgggacatgtctctg
ccgctgatcgtcacactcagcatcatctcagtcatgctgcttgccgccatgatcgccatt
gctgtgaagtgcaagagggagaacaaggagatccgcacctacaactgccgcattgctgag
tattcgcacccacagctgggcaagagcaagaagaagaagatcaacaagaacgacatcatg
ctggtgcagagcgaggtggaggagcgcgacaccatgaacgtgatgaatgtggtcagcagc
ccctcgttggccacctcgcccatgtactttgactaccagacacgccttcccctcagctca
cccaggtctgaggtcatgtacctcaaacccagcgccaacaacctcagcgtccctcaagga
catgttggctgtcacaccagcttcacggggcctgtgactagcactacggagacgccggtt
aacaggatgtcgataattcagaccgacagtttccccgctgagcccaattacatggggagc
aggcagcagtttgttcaaagcagttccacgtttaaggacccggagagggcgagcctgagg
gacagtgggcatggggacagcgaccaggcggacagcgatcaggacaccaataaaggctcc
tgctgtgacatgtccgccaaggaggcgctcaagatgaaagcaactgggctcaagccccag
cctcttgaacaggaagaggactgtgtgaactgcacggatgagtgtcgggtactgggtcac
tcggaccgctgctggatgccccagttccctgctgcgggcgggggaggggcaggcgtcccc
caggccgagggctcagactaccgcaccaacctgtttgttcccgctggcatggaggccgtg
gctgtggagcccgagacttatgaaacggtgggcaaccctaatggtaagaagactttctgc
acattcggcaaggagcggcgagaccacaccatcctggtggccaacgtcaagccttacctg
aaggccaagcgtgccctcagcccgttgcttcaggaagtgccctcggcctcatgcagccct
accaaaggctgcaacagcggctcaccatgctcctcagccaaaggcgtggcggacggagct
gagggcaagcccagcaccagccactatggcgtccccgatggacagtatgcctcacccaac
aagcagagcagagagcagggctactcggaccccgtggctaaagtcctggcggaggcgcgc
tcgcggatcagccaggagacagcagccgagatgcaggactgcacgctggagcagggcggg
gtcgagttaggccggagcggtgccatggacgccgaccaagtggtcagagacatcgataaa
ctgctgcaggactgcaggggtaacgaggccacatcggtgagaaagtga
DBGET
integrated database retrieval system
