Colossoma macropomum (tambaqui): 118819154
Help
Entry
118819154 CDS
T09004
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118819154 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
118819154 (eif4a3)
03015 mRNA surveillance pathway
118819154 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118819154 (eif4a3)
03041 Spliceosome [BR:
cmao03041
]
118819154 (eif4a3)
03009 Ribosome biogenesis [BR:
cmao03009
]
118819154 (eif4a3)
03012 Translation factors [BR:
cmao03012
]
118819154 (eif4a3)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118819154 (eif4a3)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118819154 (eif4a3)
mRNA cycle factors
Stress granule specific factors
118819154 (eif4a3)
Spliceosome [BR:
cmao03041
]
Complex C
Other components
EJC/TREX
118819154 (eif4a3)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
90S particles
Helicases
118819154 (eif4a3)
Translation factors [BR:
cmao03012
]
Eukaryotic type
Initiation factors
eIF-4
118819154 (eif4a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
118819154
NCBI-ProteinID:
XP_036442722
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAPAGGRKRILKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERDSIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctcccgcaggtggaagaaagcgaatcctgaaggaggaagatatgacgaaa
atcgagtttgagacgagcgaggaggtggatgtgactccgacgtttgatacgatgggcctc
cgggaggatctgctccgcggaatctacgcctacggttttgagaaaccatcagcaatccag
caaagagccatcaagcaaatcataaaggggagagatgtgattgctcagtcacagtctggt
actggtaaaacagccacattctgcgtgtcagtcctgcagtgtctagacattcaggtgcgt
gagacccaagcgctaattttggctcctaccagagagttagccggacaaatccaaaaggtg
ctgcttgcgttgggtgactacatgaacgttcagtgccatgcctgcattggtggcacaaac
gtaggggaagacatcaggaagctggactatggtcagcatgtggtagcaggaacccctggc
agagtgtttgatatgatccgcaggagaagtctcaggacccgtgctattaagatgctggtt
ttggatgaagctgatgaaatgctcaacaaaggttttaaggagcagatctatgatgtgtac
cggtacctgcctcctgccactcaggtggttctgatcagtgccaccctgccgcatgagatc
ctggagatgaccaacaagttcatgacagatcccatccgtattctggtcaaacgtgatgag
ttgacgctggagggcattaagcagttcttcgtggccgtggagagagaagagtggaagttt
gacacactctgtgacctgtatgacacgctcaccattacacaggcagtcatcttttgcaac
accaaacgaaaggtggactggctgactgagaagatgagggaggcaaacttcactgtgtct
tctatgcatggagacatgccacagaaagagagagattctattatgaaggagttccgatct
ggagccagccgagtgctaatctctacagacgtgtgggccagagggttggatgtgcctcag
gtctcacttatcatcaactatgacttgcccaacaacagagagttgtacatccacagaatt
ggacgatcaggacgttatggccgcaagggtgtggcaatcaacttcgtgaagaatgatgac
atccgcatccttcgtgatattgagcagtactactcaacacagattgatgaaatgccaatg
aatgtggcggacctgatctga
DBGET
integrated database retrieval system
