Colossoma macropomum (tambaqui): 118819169
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Entry
118819169 CDS
T09004
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118819169 (sox2)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118819169 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118819169
NCBI-ProteinID:
XP_036442744
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MYSMMETELKPPAPQPNAGATGNGNNPGGNNQKSTPERVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYALPGGLLAPGGGGVGGVGVGVGVGVGVGVGVGSGVGAGMNQRMDGYAHMNGWSNGGY
GMMQDQLGYAQHAGLNAPMQTTATAPVHRYDMSALQYGSMTSAQTYMNGSPTYSSMAYSQ
QQSGPPMSLHGSMSSGVKSESSASPPAVVTSSSHSRAAAAQPCQTGDLRDMISMYLPGAE
VQEQTGQSRLHLSQHYQGAPVHGTTINGTLPLTHM
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggagaccgagctgaagcccccggcccctcagcccaacgctggggcc
acggggaacggcaacaaccccgggggcaacaaccagaagagcaccccggagagggtcaag
agacccatgaacgccttcatggtgtggtcccggggccagcgcaggaagatggcccaggag
aaccccaaaatgcacaactcggagatcagcaagaggctgggggccgagtggaagctgctg
tccgagtccgagaagagacccttcatcgacgaggccaagaggctgcgcgccttgcacatg
aaggagcacccggattacaagtaccggccgcgcaggaaaaccaagacgctgatgaagaag
gacaagtacgcgctgcccggcgggctcctggcgcccggaggcggcggcgtcggcggcgtc
ggggtgggcgtcggagtcggagtcggcgtcggggtcggggtcggctccggcgtcggggcc
ggcatgaaccagcggatggacggctacgcgcacatgaacggctggagcaacggcggctac
ggcatgatgcaggaccagctgggctacgcgcagcacgccggcctcaacgcgcccatgcag
accacggccacggcgcccgtgcaccggtacgacatgagcgcgctccagtacggctccatg
acgagcgcgcagacgtacatgaacggctcgcccacgtacagcagcatggcgtactcgcag
cagcagagcggaccccccatgagcctgcacggctccatgagctcgggggtgaagtccgag
tccagcgcgagtcccccggccgtggtcacctccagctcgcactcgcgcgccgccgcagcg
cagccgtgccagacaggcgatctgagggacatgatcagcatgtaccttcccggggcggag
gtgcaggagcaaacgggccaaagcagactgcacctgtcccagcactaccagggcgcacct
gtgcacgggacgaccatcaacggcacgctgcccttaacgcacatgtag
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integrated database retrieval system
