KEGG   Colossoma macropomum (tambaqui): 118819172
Entry
118819172         CDS       T09004                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118819172 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118819172 (exosc6)
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118819172 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 118819172
NCBI-ProteinID: XP_036442748
LinkDB
Position
Unknown
AA seq 271 aa
MPVDTKRVRGPEESQSPLLFLSPTTQTCEVRSRPGNRGKGDVRPLFARCGLVSQAKGSAY
IEAGNTKIICSVYGPRETERKDETDMKSGRLVCDVRLAPFSFLKRGAWIQGSEEKDLSLA
LSESMQPGVCLHRYPRSQIEVNVMVLENDGSVLAHAVTCASMALADAGIEMYDVVLGCAL
RQDGNSCLLDPDFSEERGSWQAGYGENQGRVTVALLPNLNQVSGLHADGEMREETLTAAV
RTCMDGCHKLYPVVQQAILRAVKRKAPPPEK
NT seq 816 nt   +upstreamnt  +downstreamnt
atgccagtagatacgaagcgtgttcgcggtccggaggagtctcagtctccgctgttattt
ctatctcctaccacgcaaacgtgtgaagtccgcagcaggccgggcaatcgcggaaaaggg
gacgttcggccgctgttcgcgcgctgtggtctggtgagccaggcgaagggctctgcctac
atcgaggccggcaacacaaagatcatctgttctgtgtacgggccacgagagaccgagcgg
aaagacgaaaccgacatgaaaagcggtcgccttgtgtgcgacgtgaggctcgctccgttc
tccttcttgaaaaggggcgcgtggatccaaggcagcgaggagaaggacctgtccttggcg
ctgtcagagagcatgcagcccggcgtgtgcctgcaccggtacccgcgctcccagatagaa
gtgaacgtaatggtgttggagaacgacggttctgttctggcacacgccgtgacctgcgct
tccatggcgctggcggacgccggcatcgagatgtacgacgtggtgctgggctgcgcgctg
cgtcaggatggaaactcgtgcctcctggacccggacttctctgaggaaagagggagctgg
caggcgggctatggtgagaatcagggccgcgttaccgtcgcactcctgcccaacctcaat
caagtatcgggcctgcacgcggacggggagatgcgcgaagagacactaaccgcggccgtg
aggacgtgcatggatgggtgtcataagctgtatccagtggtgcagcaggccatactacgg
gctgttaagagaaaagcgccacctcccgaaaaataa

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