KEGG   Colossoma macropomum (tambaqui): 118819189
Entry
118819189         CDS       T09004                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmao03009]
    118819189 (wdr18)
Ribosome biogenesis [BR:cmao03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    118819189 (wdr18)
SSDB
Motif
Pfam: WD40_alt WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR54 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 118819189
NCBI-ProteinID: XP_036442770
LinkDB
Position
Unknown
AA seq 431 aa
MSAPMEVVLSADSAGQLWNCAVFDPHTGTNLLSYRGGNSSARSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYVLAGIAEAVYLWEVSTGNLLVILNRH
YQDLSCLRFTDDSSHFVSGGKDNLALVWNLASVVQLDSSRTPEPRHVLSRHTLPITDIHC
GLMGPQARVATASLDQTVKLWEISSGEMLLSVLFDVSIMSVTLDPCEYFAFCGGSDGSIF
QVSLCSTTLSRDKTFQSDSEGNQVFKGHRNMVTCLSVSMDGTLLLSGSHDETVRMWDIQS
KQCIRCINHKGQVTNAVIIPAPGNMFLPDSRPAVPLPRFSRHLNPSEQGEGTGTGGACLR
LGNNCQDPEETYLEKADRLHSLMCAVTDKSVFGDGENTKVRVSELEEEVRTLKKINKDLY
EFSTQLLTKPN
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtcggcgcccatggaggttgtgttatcagccgattcggctggtcagctgtggaactgc
gcggttttcgaccctcacactggaacgaatctcttgtcctaccgagggggaaactcgtct
gcccgctcgttaaccgtcctgaacggagaatacatcctgggagctcagctggggaagaac
ttcatcaacgtgtgggagatacaaagaaaggaccagctgcagcagaaaattgtgtgtcct
gggattgtaacctgcctaacggcgtctcccaacggcctctatgtgctggcaggcattgct
gaagctgtatacctgtgggaggtctcaacaggaaacctgctggttattttgaatcgacac
tatcaagacctgagctgtctgcgtttcacggatgacagcagccattttgtgtctggagga
aaggacaatctagcacttgtgtggaatcttgccagtgttgtgcagctggattcgtctcgc
acccctgagcctcgacatgtgttatcccgccacactctccccatcacggacatccactgc
ggtctgatgggacctcaggccagagtagctactgcatctttagatcaaactgttaagctg
tgggaaatttcctctggagagatgcttctgtcggtccttttcgatgtcagcatcatgtca
gtgactcttgacccctgcgagtactttgcgttctgcggaggaagtgatggaagtatcttt
caggtgtccctctgcagcacgactttaagccgggataagactttccagtcagacagtgaa
ggcaatcaggtgttcaaaggccacaggaacatggtgacgtgtctctccgtctccatggac
ggcacactgttgctgtcaggttcccacgatgaaacggtcaggatgtgggacatccagagc
aagcagtgtatccgctgcatcaaccacaaaggtcaggtcaccaacgctgtcatcattcca
gctcctggcaacatgttcctcccggacagccggcctgctgtgccgctgccacgcttcagc
cgccacctcaacccttctgagcagggcgagggaaccggaacaggaggagcgtgtctgaga
ctgggcaacaactgccaggacccagaggagacctatctggagaaggcagaccgtctccat
tctcttatgtgtgctgtcacagacaagagtgtgttcggtgatggagagaatacgaaggtt
cgcgtatctgagttggaagaagaagtgaggaccctgaagaaaatcaacaaagacctgtac
gagttctccacgcagctccttaccaagcctaattag

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