KEGG   Colossoma macropomum (tambaqui): 118819405
Entry
118819405         CDS       T09004                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    118819405
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmao01009]
    118819405
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmao04515]
    118819405
Protein phosphatases and associated proteins [BR:cmao01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118819405
Cell adhesion molecules [BR:cmao04515]
 Cadherins
  Protocadherins
   118819405
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2 CD34_antigen Adeno_E3_CR2
Other DBs
NCBI-GeneID: 118819405
NCBI-ProteinID: XP_036443071
LinkDB
Position
Unknown
AA seq 885 aa
MSTIHRGACLASKGKFWALCILLLYTSPLSCFSNFSHLIYKIKEGLPKGTLIGAIGEDLK
LDFSVDPPRLFNLELKQISSQYVNLNNTTGELYTSALEIDREALCSDSHEGQGCAIFLDV
IILPQQYFQLVKIKIIIEDVNDNRPYFPVDEIRVSVPENAPVNARFAVEQSAVDPDVGIN
GVQTYWLVNDYGVFTLDVEENEGGELTPFLIVTETLDRETQAEYLTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESQVNVTVFGNTTKGAQLARLHAFDPDQGANAQITYTFSER
VTRETRSLFHLDKFTGVIKLAGKIDTDTGKFYKLVVLANGPACIPDVATVTLHVIKVVSG
PPAIIPRYIAPEKDGVVSMSESEPPFSPIAFFTIKNVDPRQGVVCLLEGTGPFRLLPYKH
LKNEYLLETTDILDYEQQKDYELTVVVKNTYGSVVKTLVKVQVLDVNDNAPIFKQSLIDI
KVEENNAPDTFLAKLQATDEDSDSRGEVLYLLGSDAPSIFYLDRLTGVLTVTTSLDREEK
ETYRFMVRAVDCGTPRKESIATVVVTVLDRNDNSPRFINKDFTFFVPENFPGFGEIGVLS
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTPLDREQQGTYYLWIEAVDGGKPAL
SCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPTTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRKGGEPGSFDIDPDTGNITLRKALSNRGLYSLLVKVSDHGQPEPLHSTVLVNLFVN
ETISNESYIQSLLTREEEIGIEEIRPPNRLARGPEYAELFPCQPVLIALSTTCLGLFFIV
VSLTAYICCKKQKKHKKKRLEVEIPLKMKTDMQAMDRKLMELSNI
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtccaccatacaccgcggtgcttgcctcgccagtaaaggaaagttctgggctttgtgc
attctcctgctttacacgagccctctctcctgcttttcaaatttcagccatctcatctac
aagataaaagaaggcttacccaaagggactctcataggggctatcggtgaagacttaaag
ttggatttctcggttgatcctcctcgtttgttcaatctggagctaaagcagatcagctct
cagtatgtgaacctgaataataccactggggagctgtacacatctgccttggagattgac
agagaggctctgtgttcagactcccacgagggccagggctgcgctatctttctggacgtg
atcattctgccacagcagtacttccagctagttaagatcaaaatcatcattgaagacgtc
aacgacaataggccctatttcccagtggacgagattagagtgtctgtgccggaaaacgca
ccggtgaatgcccggtttgcagtagagcaatctgctgtagacccagatgtaggcatcaat
ggggtgcagacctattggcttgtcaatgactatggagttttcactctggacgtggaggaa
aacgaagggggtgagctaacaccttttcttatcgttactgaaacgctcgacagggagacg
caggcggaatatttaactgacatcatagctgaagatggaggctccccgcctcttttgggc
actgctactcttagaataatcatcacagacgtcaatgataactgccccaagttcacagag
tctcaggtgaacgtgaccgttttcgggaacaccactaagggcgcacagttggcacgcctc
cacgcctttgacccagatcagggtgccaatgcccaaatcacttacactttcagcgagcgg
gtcacccgagaaaccaggagcctgtttcatttggataagttcacaggggtcatcaagcta
gctggaaaaattgacactgatactggaaagttctacaagttggttgtgctggccaatggc
ccagcctgcatcccagatgttgctacagtcacactccacgtcatcaaagtggtttcaggc
ccaccagccattataccacgctacattgcccctgagaaagatggtgtggtatctatgagc
gaatcagagccaccgttttccccaattgcatttttcaccataaagaatgtggatcctagg
caaggggtcgtgtgccttctggaaggaacaggacctttcaggcttttgccctataaacat
ttaaaaaatgagtatttgctggagaccacggatattttggattatgagcagcagaaggat
tatgaactgactgtggtggtgaagaacacctatggatcggttgttaagacactggtgaaa
gtgcaggtgttggatgttaatgacaatgcaccaatctttaagcagtcacttatcgacatt
aaggtggaggaaaacaatgctccggacacatttcttgctaagctgcaggcgactgacgag
gacagcgatagtcggggtgaggtgctttatcttcttggctcagatgctcccagcatcttc
tacctggatcggttgaccggagtcttaaccgtgaccacatctctggaccgtgaggagaag
gagacctaccggtttatggtgcgagccgtagactgtggcactccgaggaaagagtccatc
gccacagtggtggtcaccgtgttggaccgcaacgacaacagccctcgcttcatcaacaag
gacttcaccttcttcgtgccggagaactttccaggctttggggagatcggagtgctgtcc
gtcacagatgcagatgcgggggaaaacggctgggtggcactgtcgatcctcaacgggagt
gacatctttgtgatcgacacaggacgaggagctctgagggccaagacgcccctcgacagg
gagcagcaaggaacgtattatctctggatcgaggctgtggacggaggtaaacctgcactg
tcctgtgtcaccatggttaccgttctgctcctggatgtcaacgacaacccgcccattgtg
ctgtttccccagtctaaccagtcttacatgctggtccttcccactacactcccaggaaca
tccatcacagaagtctacgccgtggaccgggacactggcatgaatgccgtcatcgcttac
agcatcatcaagcggaagggtggcgagccgggctccttcgacattgacccggatacgggg
aacatcactctcaggaaagccttgagcaacagaggcctctacagcctgctggtcaaagtc
agtgatcatgggcagcctgagccactccattccaccgttctggtcaatctctttgtcaac
gagaccatcagcaatgagagctacatccagagcctattgaccagggaagaggagattggc
attgaggagatcaggccaccgaacaggctagcaagggggccggagtacgctgagctattc
ccctgccagcctgtacttatcgccctcagcaccacttgcctgggactgttttttatagtg
gtgtcactgactgcgtacatttgctgtaagaagcagaaaaagcataaaaagaaaaggttg
gaggtggagatccctttaaaaatgaagactgacatgcaggccatggacaggaagctcatg
gagctttctaacatatga

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