Colossoma macropomum (tambaqui): 118819432
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Entry
118819432 CDS
T09004
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmao03037
]
118819432 (ushbp1)
Cilium and associated proteins [BR:
cmao03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118819432 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
LIN9_C
DUF2089
Motif
Other DBs
NCBI-GeneID:
118819432
NCBI-ProteinID:
XP_036443118
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MTEKNDRLASADSELAQCEAEVGTLLRIIAELNVKMGALQIPREAKNYESQGQACTAVSS
LNSSPPAPQPSPVVDTGTASVESVAKQGQLSEGGSGELWIRLQQVLSSLESSASRGRTLV
EPYVHDDGKTQAEHITAARESWVQATQVLEEMERELGISYTSALPSEERQRYQKDVLSLD
KLNRDLSANIQSHQDELKSAEGAILEMEEEKKKLREQLEELKRKWLIWASPSPPRSPSLS
SSRTPSPCWSSPAFPGSPLLSRRLPVSPPASPSLPPRVHPSSSMLETETERLQRCLDRLK
ARNERLTAALDRRKSEQEQVSMALSRHEADCSALNMALAYCEECEEAYGDLLSLYEARKQ
QSAALAAPSPPEKPECLISVQEESVCTQVDTAESTQSSLPAEEFEDKTGVIRQRITRLKQ
DRAAVCIPEQTRTGEGKLSPDTGTLAGARRNSSASSNNPKGEKAALLYELVTVREEMSEL
RGLIRLKEKERRCLEFSLMAHRCQDAAGSAIAESLREELEDRRAEQQRIDENRAKLESGG
GIPGPRNHAIMRELRAALLREQTLKRRVTSLRDSLDSALLDCTTQRRVSKEEVARLSLCN
NKAMSAYRNARKKHHEQLWRLERQMTAMTERHAAQLAELKATLEALEWKREETVL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaagaatgacagactggcgtctgctgactcagagctggctcagtgcgaggca
gaggtgggcactttactccgaattatagctgagctcaatgtgaagatgggtgccctgcaa
ataccacgggaagcaaaaaattatgagtcacagggacaggcctgcacagctgtttcaagc
ctgaactcgagtccgccagcaccacagccgagcccagtggtggacactggcacagcatct
gtggagtcagtagccaaacaaggccagctatctgaaggtggcagtggagagctatggata
aggctccagcaagttttgtccagtctggagtcttcggccagcagggggagaacactggtc
gagccctacgttcatgatgatggaaaaacccaggcagaacatattaccgcagcgcgtgag
agctgggttcaggccacacaagtgttggaggaaatggagagggagcttggaatctcttac
acatctgcattgccttctgaggagcgtcagcgctatcaaaaagatgtgctctcgctggat
aaactcaaccgagacctcagcgccaacatacagagtcatcaggatgaactgaagagtgca
gagggggccattctggagatggaggaggagaagaaaaagcttcgagaacagctggaggag
ctcaaaagaaaatggctgatttgggcaagtccttccccacccaggagtccatccttgtcc
tctagtaggaccccgagcccctgctggtcctctcctgcgtttcctgggtctcccctgctg
tcacgcaggctgcctgtctcacctcctgcctccccatccctgccaccccgagtccatccc
tccagctccatgctggagacggagactgagcggctccagaggtgcctggacaggctgaaa
gcaaggaacgagcgtctgacggcagctctggacagacggaagagtgagcaggagcaggtc
agcatggctctcagccgccacgaggccgactgctccgcgctgaatatggctctggcttac
tgtgaagagtgtgaagaggcctacggtgatctattgtccctgtatgaagccaggaaacaa
cagagtgctgcgttggcagcaccatctcccccagaaaagcctgagtgtttgatttctgtt
caagaagagtcagtctgtacacaggtggacactgcagagtccacacagtccagtttgcca
gcagaggagtttgaagataagactggagtgattcggcagaggatcacccggctgaaacag
gacagggcagcagtgtgtattccagagcagacaaggacaggagaaggaaagctaagccct
gatacaggcacgctggctggagccaggagaaacagcagtgcctcctcaaataaccccaaa
ggagagaaagccgcactgctgtatgagctggtcactgtcagggaggagatgtcagagctg
cgggggctcatcagactgaaggagaaggagagacgctgtctggagttctctttgatggcc
cataggtgtcaggacgctgccgggtctgcgatagcagagagcctgcgagaggagctggag
gacaggagagcagagcagcagaggatagatgagaatcgggccaagctggaaagcggaggg
ggaattcctgggccacggaatcacgccatcatgagagaactcagagcagccctgctaaga
gagcagacactaaagaggagagtgacgtctttacgagattctctggactctgccctctta
gactgcaccacccagagaagagttagcaaggaagaagttgcccgcctctctctctgtaac
aataaagccatgagtgcgtacaggaacgcacgcaagaagcaccacgagcagctgtggagg
ttagagcggcaaatgacggccatgacagagcgtcacgctgcccaactggctgagctcaaa
gctacactggaggcactggagtggaaaagggaggaaactgtgctctga
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