Colossoma macropomum (tambaqui): 118819510
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Entry
118819510 CDS
T09004
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118819510 (pkd1l2a)
04091 Lectins [BR:
cmao04091
]
118819510 (pkd1l2a)
Ion channels [BR:
cmao04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118819510 (pkd1l2a)
Lectins [BR:
cmao04091
]
C-Type lectins
Others
118819510 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
GPS
PKD
PKD_4
Lactamase_B_3
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
118819510
NCBI-ProteinID:
XP_036443230
LinkDB
All DBs
Position
Unknown
AA seq
2518 aa
AA seq
DB search
MATHTLSTLLLALVFAVTAADVEVNIESLSCPEQQQAFEGSCFEFVALQCSFLSAQGWCE
RGGGHLAFIQNDETQQFLQKHLQPQLDWWLGLAPTSFNLSLDSADTEGSLSWLDGSDVSY
SNWLGEPIPGAGCGYISKDSGFQWGTSGNCSQEFYFICQFESGHSLACADHNATLQCGSG
QVIEIDDSFYGRKTRHYCRTSYSPTHTSLQEECSWMDVVDLVSEHCHGLQVCQAAADVAS
FGDPCPGLGSYLSVEYHCKDALHLLMDKLAAVFENVTLRVKWLLHPFQGNLTCTLTTGDG
HTLDPYRPEGLQGIVVHKYEHAGVYTVTVECSTSEWHVTAQKTITILEPLGEFGIIRCHS
SNQSTNSDNCTGLYRHALRIQVELSAGTNVTYKIQLKGMEIAHLPAVRGIIPHNITLPPE
TIQRLGPGCHQLTLLASNEVTTTIISAALQLCLVEPVEGLLASIAPEQDICSGSALNVNV
SLGSGAPVELLFMISGVNDSISETHQMLNGSIHVFNISSTIKGAVNVLVRAWNLFSVIEV
DAGNITVNCQDDTVAQDGNTTEALVRIPRDSNLVITANPENPVIGTASVMLGINGLNGNA
RLYTFYWSCSGTCPCNVSTETEMHEISAACLPPPYSFSLYFLTATKKTGETQPQTATRCI
SVRPGTDLNPVITCSNCNPVNTSVGVTLQLHCEDCQEMVWYFEDTNPVSGVLSSCYSNSG
QKPLIMKKKGTSSLTIRSSTLVRAQQNINVVAYGVKDGLSGSAEFTVPIFSASSTASSTL
QPASHVPTTQPTSETSVSPTSQPHTSSTMASSYAPFNSASVTVLPSVSPASLYSPPSCIV
TPTVGDVFSPFNATCTVDPLFCKSTACTYCFRTSAGDYLHCGHEETVESLFFPLGTESNH
SVVVVITVENGAGQKINTTLTVQVYDVSTGPTVQDLEALVSKQVNQLLQNGKLNGPALAQ
MYQSVCNKLNGDSTDGQDQDARKRLREQMLLDLGTAVNAAPFGNPSEVQMTAGAVVSLTK
QGEELTSTAQLQASSLLSNLSKSLVSLTPSEGDVKEIMKQAATPIIQAASNILKVSANTD
NQEKISKLLLNAADSIQSALLAGKRTNQEPIIISTAQISVYVNRMSPDKLQRRSFSIENS
SSASFMLPSLGPDVLPSREAVDVRMLSFGMNPFSWSEGEPISGAVGGLSLTRENGSVIPV
SNLNEEIEILLPRAAVAEVNSTFLDLGNYSTLVINVTTPDISLVLKLDPSEETPLQLLLG
FQHYPNDTNHKAKIQLPQPGSPAEERYTWVLGPQDMAVEAGVYYLLVRPIVEAGVNSSNA
SVFITSIAAQCKYWDETKTNWSDYGCRVGPRTTPLVTQCLCTHLTFFGSSFFVMPNLVDV
SRTAELFATFVNNPVVGCFVGAIFLAYLMVVIWARKKDIQDATKVKVTVLEDNDPLAEYR
YLLTITTGHRRGASTSSQVTVTLLGSEGESEPHHLTDPDKPVFERGGVDMFLLTTPFSLG
ELQSIRLWHDNSGKYPAWYVNKVMVQDLETGQKWHFLCSSWLAVDMGECALDKVFPVATE
MDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPTSNFTRVQRVSCCFSLLLCTMLTSIMFW
GIPTDPSEQTMDLGKIEFTWQQVMIGIQSSIIMFPINLLIVTIFRNIRPRERKPEEASKQ
HSRMDSTKQGKTGRVSPTQPPSPQSDLREITPDAVIKDIKRIAQSLSKVLRSPMPRIESG
KMDINALLSLVEDIIRQQNRAGGEFYSDDCKKELSLSLGAVNLQERSPERMPNEKRNVYR
QYLYKQLQNVEKELKLLGPSRFSKPEGYNQAVLQVQSMKELLVPQLSSSSIREQFACSSS
PVEGSGGGSKKCCQKGLPWWFVFVAWFLVAATSGVSAYFTMMYGLTYGKERSISWLISMV
VSFFESLFITQPVKVLGFAVFFALVLKRVDQEEYGDVPIDGDLANSNDPDGVRLARRDST
CSFYQPPPPSDIEKMRSNMIKEQKVFALIREILIYVGFLWMLLLVAYGQRDPNAYFLTQH
IQQSFSNGISDSMNHKDVFTWANTTLLRNLFGRQPGFITDGNSKLVGNARLRQVRVQKGS
CRTASSMRCSVPDCHAPYSWEVEDMGSYGPGWNRSLDANISKTLLTPWQYQTQSRLRAHP
VWGGVALYRGGGFVVDLGPNRQNASSLLQYLFDNIWLDVYTRAVFVEFTVYNANVNLFCI
VTLMFETTAVGAFQCRSELQSVRLYQSTGGLHIFVMASEVIYFLFIFYYMFQQGKLMKLQ
KWEYFRSKWNLLELAIIILSWSALSVFVKRTLLGNQSMEYYQNHKDQFAGFNETATADAV
LGYIIAFLVLLATVKLWHLLRLNPKLHMITSTLQRAWNDISGFIVVMTIMFLAYSIACNL
MYGWKLYSYRTLLNAAQTMVSLQLGIFNYEEVLDYNPVLGAFVIGSCIIFMTFVVLNLFI
SVILVAFSEEQLHHKPSEEEEIVDLMLMKICSLFGVKVKMNQLTDNATVSNTAPSVVS
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atggccacacatactctgtccactctgttgcttgcgctggtcttcgctgtcactgcagct
gatgttgaagtgaacatagagtctctgtcctgtccagagcagcagcaggcctttgagggc
tcctgctttgagtttgtggctctgcagtgcagcttcctcagcgcacagggctggtgtgag
cgtggtggtggacacctggccttcatccagaacgatgagactcagcagtttctccagaaa
catctgcagccacagctggactggtggctggggctggcgcccacctccttcaaccttagc
ctggactccgctgacactgagggttccttgtcttggctggatggctctgatgtgagctac
tctaactggctcggtgagcccatcccgggtgcaggctgtggttacatctcaaaagactct
ggatttcaatggggaacaagcggtaactgcagtcaggagttctactttatctgccagttt
gagtcgggacactctctagcctgcgcagaccataatgcaacactgcagtgtggatctggg
caggtgatagagattgatgacagtttctacggcaggaagacgcggcactactgcagaacc
agctattctcccactcacacatccttacaggaggagtgcagctggatggacgtggtggac
ttggtttctgagcactgccatggcctgcaggtttgccaggccgcagcagacgtagcatcc
tttggtgatccttgcccgggcctggggagttacctgtcagtggagtatcactgcaaagac
gctcttcacctgctgatggacaaactggctgctgtttttgaaaatgtcactttaagagta
aagtggctgctccatccttttcaaggcaacctcacatgcactttgaccaccggtgatggg
cacactctcgacccctacaggcctgaagggttacagggtatcgtggtgcacaagtacgaa
cacgctggagtctacactgttacagtggagtgcagcaccagtgagtggcatgtgacagcc
cagaaaaccatcaccatcctggagccactaggagaatttgggataataagatgccacagc
tcaaatcaatcaacaaacagtgacaactgcacaggtctctaccgacatgcactgagaatc
caagtggagctaagtgcaggaactaacgtcacctacaaaattcagcttaaagggatggaa
attgctcacttgcctgcagtcagagggattattccccacaacatcaccttacctccagaa
accatacagcggctgggcccaggatgccatcagctgactctcttggcctccaatgaggtg
acaactacaattatctctgctgctctacagctgtgcttggtggagccagtggagggactg
ctggcctctattgcaccagagcaggatatttgctcaggatcagccctgaacgttaatgtc
tctctgggtagcggagctccagtggaactgctctttatgatctctggggtcaatgacagt
atctctgagacccatcagatgctaaatggcagcatacatgtcttcaacatctccagcaca
ataaaaggtgcagtgaatgttctggtcagggcatggaatttgttttcagtgatagaagtg
gatgctggaaacataacagtgaactgccaggatgacacagtggcccaggatggaaacacg
actgaagcactcgttagaatcccaagagacagtaacctggtcatcactgcaaatccagaa
aacccagtcatcggtacagccagcgtcatgctgggaattaatggcctaaatggaaatgct
agactttatacattttactggagctgcagtggaacttgtccctgtaatgtcagtactgag
actgaaatgcatgagataagtgcagcttgtctccctccaccttatagtttttcactctac
tttctgactgccacaaaaaagaccggggagacgcagccacagacggcgaccagatgcatc
tctgtcagaccagggactgatttaaacccagtcatcacatgttccaattgcaatccagtg
aataccagcgttggtgttactttgcagttgcactgtgaagactgtcaggaaatggtttgg
tactttgaggacacgaaccctgtatctggtgttttaagttcctgctattctaatagtgga
cagaagccattgataatgaagaagaaaggaaccagctctctcacaattaggagttcaact
ctggtcagagcacagcagaacatcaatgtcgtggcttatggtgtgaaagatggcttatct
ggatctgctgagttcaccgttccaatcttcagtgcttcctccactgcgtcgtcaacatta
caacctgctagtcatgtgccgacaacgcagccaacctctgagaccagtgtatcccctaca
tcacagcctcatacttcatccaccatggcttcatcctatgctccttttaattcagcctca
gttactgtattgccatctgtttccccagctagcctttacagcccaccctcctgtatcgtt
acccccactgtgggagatgttttctcgcccttcaacgccacgtgcactgtagatccttta
ttctgcaaaagcacagcctgcacttattgtttcagaacttctgctggagactaccttcac
tgtggccatgaggagacggtggagtcactcttctttcctctgggaactgaaagtaaccat
agtgtggttgtggtcatcactgttgagaacggagcaggacagaagattaatactacttta
actgtccaggtatatgatgtcagcactgggcccacagtgcaggatctggaggcccttgtg
tccaagcaggtgaatcagctgctgcagaatggcaagctcaatggtccagcgctggcacag
atgtaccaatccgtgtgtaacaagctaaatggggactcaactgacggccaagatcaggat
gccagaaaaaggttacgggaacagatgctgttagacctgggcacagctgtgaatgctgcc
cccttcgggaacccttcagaagtgcagatgacagctggtgctgtggtgagcctcaccaaa
cagggcgaggagttgacctctacagcccagttacaggccagctctcttctgtcaaacctc
agtaaatccctggtctctctcactccctcagagggggatgtcaaagaaataatgaagcag
gcggccacacccatcattcaggctgccagtaacatcctcaaagtgtctgccaacacagac
aaccaggaaaagatctcaaaacttctgctgaatgcagcagacagcattcaaagtgccctg
ctggccgggaaaaggacaaaccaagagccgatcatcattagcactgcccagatcagcgtg
tatgtaaacagaatgtctccagataagcttcagagacggtccttcagcattgagaacagc
agctcagccagcttcatgcttccatctctgggtcctgatgtgctgccttcccgggaagcg
gtggatgtgcggatgctgagttttgggatgaaccctttctcctggagtgaaggagagccc
ataagtggagcagtcgggggtctctctcttactagagagaacggttctgtcattccagtc
tcaaacctcaatgaggagattgagattctcttaccaagagcagcggtggctgaggtaaac
agcacatttcttgacctgggaaattacagcactctggtcatcaatgttaccacaccggac
atatctctcgtcttgaaattggacccttcagaagagacacctttacagttactcttgggt
tttcaacactacccaaatgacaccaaccacaaggccaaaatccaactccctcaaccaggc
agcccagcagaggagaggtacacatgggtgctgggcccacaggacatggcagtggaagca
ggagtttactatctattagtgaggcccatagtagaagcgggtgtaaactcctcaaatgct
tctgtgttcatcacgtccattgctgctcaatgcaagtactgggatgagactaagaccaac
tggagcgactatggctgtcgggttggcccccgcaccacacccctagtcactcagtgcctg
tgcacccacctgacgttttttgggagctccttctttgtcatgcccaacctggtcgacgtg
tcccgcaccgctgagctttttgccacatttgtcaacaaccccgtggtggggtgttttgtc
ggtgctatcttcctggcctacctcatggtggtgatatgggcacgaaaaaaggacatccag
gacgccactaaggtgaaagtcactgtgctggaggacaatgatcccttggctgaatatcgc
tacttattgaccatcaccactgggcatcgtcggggagcttccacttcctctcaggttaca
gtgactctgctgggctctgagggggagagtgagccccatcatctgactgacccagacaag
ccagtgtttgagaggggaggagtggacatgttcctcctcaccactccattttcactggga
gagcttcagagcatcagactgtggcatgataactccggaaaatatcctgcttggtatgtt
aacaaagtgatggtacaagacctggagactgggcagaagtggcatttcttgtgcagctca
tggctggccgttgacatgggggagtgcgccctggacaaagtgttccctgtagcaacagag
atggacttgaaaaggtttagcaatctgttcttcatgaagactgcaaaggatttccgagat
ggtcacatatggttctctgtgatcagccggccgcccactagtaacttcactcgtgtgcag
cgtgtttcctgttgtttttccctgctgctctgcaccatgctgaccagcatcatgttctgg
ggaattcccactgacccctctgagcagaccatggacttaggtaagatcgagtttacctgg
cagcaagtgatgattggcatccagagttccatcatcatgttccccatcaacctccttatc
gtgaccatcttcagaaacatccgcccaagagaacgaaagccagaggaagcttccaaacag
cactccaggatggactctactaagcaaggaaaaacaggacgtgtgtcaccgactcagcct
ccctctccacagagtgatcttcgggagatcaccccagacgctgtaatcaaggatattaaa
aggatagcccagtcactctccaaggttctgagaagccccatgcctaggatagagtctggt
aaaatggatatcaatgctctcctgtcattggttgaagatattattcggcagcaaaaccgt
gcaggtggcgagttttactctgatgactgcaagaaagagctttctctctccctgggagcc
gtaaacctgcaagagagaagtcctgaacggatgccaaatgagaaacgcaacgtctacagg
cagtatctctataagcagctccagaatgtggagaaagagctgaagctgctgggtccttca
cgattctccaaaccagaaggctataatcaggctgtgctgcaggttcagagtatgaaggaa
ctgctggtaccccagctttcctccagttccatcagggagcagtttgcctgcagctccagc
cctgtagaaggcagcggtggaggcagtaagaagtgctgtcagaaaggcctgccctggtgg
tttgtgtttgtggcctggtttcttgtggcagccacaagtggagtgtcggcatacttcact
atgatgtacgggctgacctatggaaaagagcgctccattagctggctcatttccatggtc
gtgtctttttttgagagtctcttcattacccagcctgtgaaggtccttggattcgctgtc
ttcttcgctctcgtgctaaagagagtggatcaggaggaatatggcgatgttccaattgat
ggggatcttgcaaattcaaatgatcctgatggcgtacggcttgccagaagggacagcaca
tgcagcttttatcagcctcctcctccgtctgatattgaaaagatgaggagcaacatgatc
aaagaacagaaagtctttgcactgatcagagagattctcatctatgtggggttcctctgg
atgctactgctggtggcttatggtcagcgtgatccaaacgcttacttcctcactcagcac
attcagcagagcttcagcaacggcatctcagacagtatgaaccacaaagatgtgtttacc
tgggcaaacaccacactcctacgtaacctctttggacgacaaccaggtttcatcactgat
ggaaactcgaagcttgtaggaaacgctcgtctccgtcaagttcgggtgcagaagggctcc
tgcaggacggccagctccatgcgctgctctgttcccgactgtcatgctccgtactcttgg
gaggtggaggacatgggctcctatggtccaggctggaatcgttcactagatgcaaacata
tctaagacgctgctcacaccctggcagtaccaaacccagtctagactcagagcgcatcct
gtgtggggtggagtggctctgtacagaggtggaggtttcgtagtggacctgggccccaac
aggcaaaatgcaagcagtctgcttcagtatctctttgacaacatctggttggatgtgtac
acccgggctgtcttcgtggaattcacggtttataacgccaacgtcaacctcttctgtatt
gtcactttgatgtttgagaccacggcagtgggagcattccagtgtcgcagtgagctgcag
agcgtccgcctctatcagtccaccggtggccttcatatatttgtcatggcttctgaggtc
atttattttctcttcatcttttattacatgttccagcagggtaagctcatgaagctgcaa
aaatgggaatacttcaggagcaagtggaatcttttagagcttgccatcattattttaagc
tggagtgcattatctgtatttgtcaagaggacacttttgggcaaccagagcatggagtac
tatcaaaaccacaaagaccagtttgctggtttcaatgaaactgccacagcagatgcagtt
ctcgggtacattatagctttcttggttctgctggccaccgtgaaactgtggcacctgctg
cgtctcaacccgaaacttcacatgatcacctccacgctgcagcgggcgtggaacgacatc
tccggcttcatcgtggtcatgacgatcatgttcttggcctactccattgcttgtaatctc
atgtatggttggaagctttactcataccggactcttctaaatgctgcccagaccatggtc
agcttacaactgggaatcttcaactatgaggaagttctggattataaccccgtcctcggt
gcgtttgtcattgggtcctgcatcatcttcatgacgtttgtggtgctgaacttgttcata
tccgtcatcctggtggcattcagtgaagagcagttacaccataagccctccgaagaggag
gaaattgtagacctgatgctgatgaagatatgcagcctgtttggagtcaaggtgaagatg
aaccagctgactgacaatgccacagtctccaacactgcaccttctgtcgtgtcatag
DBGET
integrated database retrieval system
