Colossoma macropomum (tambaqui): 118819512
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Entry
118819512 CDS
T09004
Symbol
arid1aa
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118819512 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118819512 (arid1aa)
03021 Transcription machinery [BR:
cmao03021
]
118819512 (arid1aa)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118819512 (arid1aa)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
ARID
118819512 (arid1aa)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118819512 (arid1aa)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118819512 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118819512
NCBI-ProteinID:
XP_036443236
LinkDB
All DBs
Position
Unknown
AA seq
2287 aa
AA seq
DB search
MAAQVASAASLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPGRGELHDRADV
GNAGGGGESEMKNGNGNPSRVNNSQNDTTGPDGNNHPGMVHHHASAFPPPSYGYSQHYGR
APFHQHGGQQSPGMAAAAGPGALSSNMMDPYQANSHDHGFPNHHFNSYGPFPSRTPYPGQ
GYAVNSPRNPPAQAAGGQAAKPQPAGGSAAMAASYNSQRYSMGNPQPTSTPTLNQLLTSP
SSTRGYPNYPQSDYNSQEGANKGPAEIGSSSQYGGGHPGWQQRTHHPPPMSPGSTGQPLG
RNQTPGSMDQIGKMRGQPYGAGSPYSQQPHQGPPGPQQGPAYPGQGYGPPGPQRYPLGMQ
GRMQYGQQMTSYGQQGPGSYGQGQQPYYGQQGQGPHSGQQQSPYPQPAPGQPGNQAPYSQ
QPHPSQPSAPHAQGGPPYQQPHMPQQPQGPMSGPPQGPSQSQPPYSQPTAPQSSQSPYPQ
QQVPPSQPQPQQQGGSQAPPVSQAQPSYPPGQGPQQTPSQQPTQAPTSATQQPTVHGQMP
QGQPTSYPQNASQQQQQSSYQRFPPPQEISQESFSSQSSAPPSSQPVASSKSGSEDMQGR
PSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGP
SPSPVSSPASATASRSGPLSPVAMPGNQMPPRPPSGQSDGIMHPAMNQPSGMGQERGFMQ
RNPQMAPYGSPQSGSALSPRQSSGGQMHGGMGPYQQNNSMGSYGPQGGQYGPQGYPRQPG
YTGMPNANYPGPGMGGSMNPMPGQGGGPPFTGMPPGRMPHGQMGARPYGPNMGPNMAPNM
GPNMGNMPPQVGSGMCPPPGLNRKPQEAAAMQHGATNSIHNRLPGYPNMSPSMMSSGPPY
GPSMNNMPGMMNTQGPPYPLGGSMPNNSSGMSPGPEFGMDGKLNQAQKLNNKVEGTPKTD
SKSKKSSSSTTTNEKITRLYELGSEPERKMWVDRYLAFIEEKAMGMSNLPAVGRRPLDLF
RLYMSVKEIGGLTQVNKNKKWRELATSLNVGTSSSAASSLKKQYIQCLYAFECKIERGED
PPPDILSAEGKKNQPKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQM
PSMQSGRSSVNLQDPFADSNDPAFSRRNTMTPNSGYQSGMSTPEMPGRMAPYEPNKDPFG
GMRKVGEQFMPGGQGPNSTLGEQFNRGPGGAIGNMPMAQRQQYPYGPGYERRPESGMGPE
GGMGPGVPQPSMMPSNTDTGMYSPNRYPPQQQRHDSYGNQYPGQGAPPGGSYPNQQPGMF
PQQQSNYKRPGEGGYPPAKRHHDGEMYSGPFSGQQQQQQPQAPPTGPSSGQQEMFNQYGS
SYPGSERRPPVPQNQFPFPFGRDRMQAGSGPNSQGSMPPQMMSSSIQSAPDGPQAGMWQG
RGEMAYPNFPNRQGPPGGPAQGPGYHAMNRSDEMMSSEQRMNHEGQWPGPRQPPYGPAGA
GPPMSRPLQSNYQSPQSMQNHIPQVSSPTPMPRPMESRTSPSKSPYMHSNIKMQKAGPPV
PASHIIPSPVQPPLMRRDPPFPPGSVEATQPVLKARRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSISNFNLIQLPGFLELIVEYFRRCLIEIFGILREYEVGDPG
QRTLLDPNALRKEETGEDEEGPVVEGMDEDDETEDEDEGEEENLSSQQQEERVSAMQVQI
KSEQRTSESKKDEDGKVMEKASITDPKTSEPPVQDLAVAQEKPKQASKFDKLPLKVVKKK
DPFVVDCSGKLGRLQEFDSGLVHWSIGGGDTTEHIQTHFESKADLLQPRKWTNQASGRKK
MSEKRESEAPVVPSSSVERRKEDDQRPSQQSPAGKLTDSVSEAREEKPSNGPEIAPEPVS
QKEKETEGPERTNQESSKPVLPNISSSSPIQRSVTVLEDEPHSKDEAPLITLSDWQDSLA
RRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHWHPERKQAPLTYEKEEEAD
EDTGHDKEEWWWDCLEMLRENCLVTLANISGQLDFSVYSESICLPLLDGLLHWAVCPSAE
AQDPFPTLGLNGALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLFGNLVRLVGDR
KVPVCREMAVVLLANLAKGDSLAARAIAVQKGSVGNLLGFLEDSLAATQFQQSQGSLLHM
QGAHFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDLSVSPLMNSLVSHVICDV
LFLIGQS
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctgcctctctcaacaccagcccgccttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gagccgggattagagagcggatctccgggccgcggggagctgcacgaccgggccgatgtt
ggaaatgctgggggaggaggggagtcggagatgaagaacgggaacgggaacccttctcga
gtgaataattctcaaaatgataccactggacccgacgggaacaaccacccagggatggta
caccatcacgcgtccgcttttccgccgccttcctacggttacagccagcactacggacgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgagcaacatgatggacccgtatcaggcgaactcgcacgaccacggcttc
cccaaccaccacttcaacagctacggcccgtttccgagccggacgccctacccgggccag
ggctacgccgtgaactccccgcgcaatcctccggctcaggcggcaggggggcaggcggcc
aagccacagccagcgggaggatccgcggctatggctgcatcctataacagtcagcggtat
tctatgggaaatccacagcccacgtccaccccgactctgaaccaactcttgacctccccg
agctcgaccaggggataccccaactacccccagagtgactacaacagtcaggaaggtgct
aacaagggaccagcggagatcggcagtagcagccagtatggtgggggccatccgggctgg
caacaaaggacccatcacccgccgcccatgagcccgggaagcacagggcagcccctcggt
agaaaccagactccaggctctatggatcagattggcaaaatgagaggtcagccatatgga
gcaggcagcccttactcccagcagcctcaccaagggcctccagggccccagcagggacct
gcatatccaggccagggctatgggcctcctggtcctcagagatatcctttgggcatgcaa
gggcgcatgcagtatggccaacagatgacgtcatatggacagcagggaccaggcagttat
gggcaagggcagcagccttattatggtcaacagggccagggccctcactctggtcagcag
cagtcgccataccctcagcctgcaccgggccagccgggcaaccaggcgccgtactcccag
cagccccacccttcacagccatctgcccctcatgcacagggtggccctccctatcaacag
cctcacatgccccagcagccccaggggcctatgtcaggacccccacagggcccatcccag
tctcagcctccatactctcagcctactgctccacagtccagtcagtcaccctacccacag
caacaggtgcccccatcccagccccagccccagcaacagggtggttcccaggctccacca
gtgtcacaggcccagcccagttatcctccaggtcagggtccccaacagaccccctcacag
cagccaacacaagcccccacatctgccacccagcagcccacagtacatggccagatgcca
cagggacagcccacatcgtacccccagaatgcttcgcagcaacagcagcagtcttcttat
cagcggtttcctcctccacaggaaatttcccaggagtctttcagctcccagtccagtgct
cctccttccagtcagcctgtggcctcctccaaaagtggctctgaggacatgcagggcagg
ccctccagtctacccgacctgtcggggtctattgatgacctaccaacaggtacagaggga
gccctcagtcctggtgtcagcacatctggggtgtccagcagtcaaggggaacagagcaat
ccagcacagtccccgttttccccccacacctcccctcacctaccaggcatccgtggtcca
tccccgtcccctgtcagctcacctgctagtgccacggcgtcccgctctggacccctttct
ccagttgccatgccaggaaatcagatgcctcctcgccccccgagtggtcagtctgatggc
atcatgcaccctgctatgaatcagcctagtggtatgggccaggagagaggattcatgcaa
aggaaccctcaaatggcaccttacggctctcctcagtctggctctgctctgtctcctcgt
cagtcttctggaggtcagatgcatggtggcatggggccttatcagcagaataactcaatg
ggcagctatgggcctcagggtggccaatatggcccacaaggttaccccaggcaaccaggc
tacactggcatgcccaatgccaattacccaggccctggcatgggtggatctatgaatccc
atgcctggccaaggaggaggaccaccttttactggcatgcctcctggtagaatgcctcat
ggacagatgggtgcccgtccatatggccctaatatggggcctaacatggctcctaacatg
gggcccaatatgggcaacatgccaccacaggtgggttctgggatgtgcccaccaccaggc
ctcaacaggaaaccacaggaagcagcagccatgcagcatggagccacaaactcgatacac
aacaggctgcctggttaccccaatatgtctcctagtatgatgagctcaggacctccatat
gggccctccatgaacaatatgccaggaatgatgaacacccagggaccaccctaccctctg
ggtggaagtatgcccaacaacagcagtggcatgtcccctggtccagaatttggcatggat
gggaaactgaaccaggcacagaagttgaataacaaggttgaggggacacctaagacagat
tccaaatccaagaagtccagttcctccacaacaaccaatgagaagatcacacgtttgtat
gagctgggctctgagccagagcggaagatgtgggtggaccgatacctagcgttcatcgag
gagaaagccatgggcatgagcaacctccccgccgtgggccgcaggccactagatctcttc
cgcctctacatgtccgtcaaggaaattggaggtctcacacaggtgaacaagaataaaaag
tggagggagcttgccacaagcctgaatgtcggcacttccagcagtgcagctagctctcta
aaaaagcagtacattcagtgtctgtacgcttttgaatgcaagatcgagcgtggagaagac
ccaccacctgacatcttgtctgcagaaggaaagaagaaccagcctaaaatccagccaccc
tccccagctgggtctggttctctacagggtccacagaccccacagtccacaagcagctct
atggcggagagtggagacttaaagcctcctactccagcttcaacaccgcatagccagatg
ccctcaatgcaaagtggcaggagcagtgtgaaccttcaggatccatttgctgacagtaat
gacccagccttttccaggagaaacactatgacccctaactctggctaccagtctggaatg
agcactccagaaatgcctggtcgcatggccccttatgagcccaacaaggacccttttggt
gggatgcgcaaagttggtgagcagttcatgcctggtggacagggtcccaacagcactcta
ggagagcagtttaaccgtggaccaggaggtgccattgggaacatgcccatggcacagaga
cagcagtatccatacggcccaggctatgagagaaggccagagtcagggatgggcccagaa
ggtggtatggggcctggagtaccacagccaagcatgatgccttctaacactgacactggg
atgtactcgccaaatcgctaccctccacaacaacagcggcatgattcctatggtaatcaa
tatcctggccagggtgcgcctcctggtggctcttacccaaatcagcaaccaggaatgttc
ccgcagcagcagtcaaactacaagagaccaggtgagggtggttaccctccagcaaaacgt
catcatgatggtgagatgtacagcggaccgttcagtggccagcagcaacagcagcaacct
caggctcctcctactggcccctcatcaggtcagcaggagatgttcaatcaatatggcagt
tcttaccctggatcagaacggcgtcctcctgtaccacaaaaccagtttccttttcccttt
ggaagagatcgaatgcaggctgggtcaggccctaactctcagggctctatgcccccacag
atgatgagtagctccatacagtcagcccctgatggcccccaggctgggatgtggcagggt
cgaggtgagatggcttatcccaactttcctaaccgacaaggtcctcctggtgggcctgcg
cagggccctggataccatgccatgaatcgatctgatgagatgatgtcatctgaacaacgc
atgaaccatgaggggcagtggccagggccacggcaacccccctacggcccagctggggct
ggcccacccatgagccgaccattgcagtccaactaccagtctccccaatcaatgcagaac
cacattccgcaggtgtccagccctacaccaatgccccgtcccatggagagcaggacttcc
cccagtaaatctccttacatgcacagcaacatcaagatgcagaaggcaggtcctccagtc
cctgcttcccacatcatcccttcccctgtacagcccccactgatgagaagagacccacca
ttcccgccaggttctgtggaggccacacaacctgttctcaaggctcgtaggcgtctcaca
atgaaagatattggcacaccagaggcatggcgagtcatgatgtcactgaaatcaggtctt
ttggccgagagcacatgggctttagataccatcaacattctactgtatgatgacaacagt
atctccaattttaatcttattcagctccctggtttcttggaactaatagtggagtatttt
aggcgttgcctcattgaaatctttgggattctgagggaatatgaagttggtgatccagga
cagagaacactgctggaccccaatgctctcagaaaagaagagactggtgaggatgaggag
gggccagtagtggagggtatggatgaagatgatgaaacagaagacgaggatgaaggagaa
gaagaaaacttgtcatcacagcagcaagaagaacgtgtttcagcaatgcaggttcaaata
aagtcggaacagaggacaagcgaatcaaaaaaagatgaagatggtaaagtcatggagaaa
gcctctattacagatcccaaaacgtcagagccacctgttcaggaccttgctgtagctcag
gagaagccgaaacaggccagcaagtttgacaaacttcccttgaaggtggtgaagaagaag
gacccctttgtggtagactgctctggcaagcttgggaggcttcaggagtttgacagtggc
ctggtgcactggagtattggagggggagacaccacagaacacattcaaacccattttgag
agcaaagcggatttattgcagccacgaaagtggaccaaccaggcatctggaaggaagaaa
atgtctgagaagagagagagcgaagcacctgtagtgccctcatctagtgtagagcgaaga
aaagaagacgaccagaggccctctcagcagtcacctgcaggaaagctgacagacagcgtt
tctgaagcaagggaagaaaagccctctaatggccctgagattgccccagagccagtatca
caaaaggaaaaagagacagagggacctgagagaacaaaccaggagagcagcaagccagtt
ctccccaacatcagctcttcctcaccgattcagcgctcagtgaccgttctggaggatgaa
cctcacagcaaggatgaagctccactaatcacgctctcagactggcaggactcgcttgct
cgtcgctgtgtttgtgtctccaacattgtccgcagtctttcatttattcctggcaatgac
ttggagatgtccaagcacccaggactgctgctgttactgggtcgtcttgtgctgcttcac
cattggcatcctgagcgtaagcaggcgcctttaacgtacgagaaggaggaggaggcagat
gaggacacaggtcatgacaaggaggaatggtggtgggactgtctggagatgctgcgagag
aactgcctggtcacattggcaaacatctcaggccagcttgacttctccgtctactctgaa
agtatctgcctgcctttgcttgatggcctgctccattgggctgtctgtccgtcggcagaa
gcccaggatcccttccccactcttgggcttaatggggctttgtctcctcagagacttgtc
ctggagacgctcagtaaactcagcatccaggacaataatgtggacctaattttggcgaca
cctcccttcagtcgactagagaagctttttgggaaccttgtacgcctggttggggaccga
aaggtacctgtatgtcgggagatggcagtcgtgctgctggccaacctggccaagggagac
agcctggcagcacgtgccattgcggtacaaaaaggcagtgtagggaaccttttaggcttt
cttgaggacagtttagcagccacacagttccagcagagccaaggctccctgctgcacatg
cagggggcacactttgaacctaccagtgtggacatgatgcgccgggctgctcgggctttg
cacgccctcgccaaggtggaggagaaccactctgagtttacgctctacgagtcacggcta
ctggacctctctgtctccccgcttatgaactctttagtgtcccatgtcatctgtgatgta
ctctttttgattggccagtcatga
DBGET
integrated database retrieval system
