Colossoma macropomum (tambaqui): 118819635
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Entry
118819635 CDS
T09004
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118819635 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118819635 (nup98)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118819635 (nup98)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118819635 (nup98)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118819635 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
118819635
NCBI-ProteinID:
XP_036443331
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNSGFGTTGGFGSSAFGTTNNTGGLFGATQNKPGG
LFGSSTFSQPVTSSTSSGFGFGAASGTSNSLFGSTNTGGGGLFSQQGNAFGANKPASFGT
FGTSTSSGGLFGTTSTTSNPFGGTSGSLFGSSGFTATQPGTTIKFNPPTGSDTMVKSGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAANTGGLFGTTGAATPSTAA
GLFGSSATNTGFSFGQNKTSFGTSTSGFGATTSSLFSQPQPANSLFKPFGQATTAQNTGF
SFGNTNTMGLFGSTAATQTGGLFGNTANTSTATGFGTGTGLFGPNNTAFGNNLFGNKPAG
FGTTTTSAPSFGTGTGLFGNKPPLTLGTNTNTSNFGFGANPAGGSLFGNKTATGGLGTGL
GTSFGAGVGTGQTSLFGNNQNKMGSTLGTVGTFGATGFNTGTSALNFGAPQQPVALTDPN
AAAAQQAVLQQQINALAYAPFGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKL
TPRPATRVRPKALTSSGSAKSQLFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYS
SPLNRETDDLASPSEYPQNGLSLRSDAEETRDGEIERGAEDDLEVSKFYTNPIAKPIPHS
QPSPSLQDTITELNMRRGVSARNGLELSSEEISLGEDSVQEDRDEELEAQKPPHPAGIVL
SRVGYYTIPSMEELGKMLNENGDCIVENFTVGRKGYGSVFFPGEVNLTNMNLDEIVHFRR
KEVIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCTQIKSPERLSEMNYEGRLENAS
RRQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEEVPPAKTDPKKMKTTIQPGLQQLP
PTQQQMAPQAQSTALLELLSRVSELDSDMADITQEQHADGVLCEEDEGALEEDAKMALRV
ETPAEHEPVSASSQIASSLGINPHTLQIMKASLFAGDDECDPFHEQLPQKILEEVASPRV
LLGKPQGGLSVGSLLQTKFLSGGGLLAHLPDVPFGGIPQKLSKPAVSDTPWPSLGPSFLL
PPPVPEVTLRTVGARRLEGPVSRECSVTLGKGRLLMDAALYMGRSFRVGWGPNWTLVHCG
DPLSTAQESKEQAADTMGFGFLPKPTKSRQITESPFKVHVEQVVGMEPKKTTESIAVYHR
PLEIGLKHSTISTEDACPFIQPEKGVEALHEYAQWIVEVNKETGDAVLGHWQQVWTLCAA
LWGRLGDQDLEAEHSGNYQEQLARRRSFSRWLAESAAQRIQEEVGQAQPHSQVEAIFSYL
TGHCISEACRLAQKSGDHRLSLLLSQAVGSQFSRDLLALQLADWNRMQTDSFIQEERLRI
FALLAGKPVWESTDCCINVCSELDWKRCVAVHLWYMLPPTASVADSLAKYEAAFQGLEDG
RKYACAPFPPYVDDTELLGLDEEMEDTESKKSLYDICFHLLKLYSVKHYSLQQLLDPSTV
TADQLDYRLSWHLWNVLQALNYTHLSLPRQGLLHASYAAQLESAGLWEMAVFVLLHIPDS
ALRERAVREMLNQHCPLEETEESAEKERFLTDKLLIPIHWIHEAKAIRACRDGDKHREAL
HLYKAGHWNHCHRLVIQNLASDCIINDNHDYLMEFLEGLAVPERSVQIQDWDTSGRVYLD
YIRVIQTLQAIQRMESPGYELERLHTDVTSLCSRIELLPCSKAKDRLAQSEMAKRVANIL
RVVLSLQQGGEGTPDPRHIPLCHLAPHIGRLPMPEDYALEELRSLTQSYLREYIVSH
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttggtgccccctttgggggaggaacaggaggatttgggacttca
tccacgtttggacagcaaaacagtgggtttggaacaacaggtggctttggctcctctgct
tttgggaccacaaacaacacaggaggtctctttggggcaactcagaacaaacctggtggg
ctctttgggtccagcacgttcagtcagcctgtcacttcctctaccagcagtgggtttggg
tttggtgctgccagtggcacctccaacagtctttttggaagcaccaacactggaggtgga
ggactcttctcccagcagggcaatgcattcggtgccaataaacctgcctcttttggcact
tttggcaccagtaccagtagtggcgggctgtttgggaccaccagcaccacttccaatcca
tttggaggcacctcagggtccctgtttggttcgtcaggtttcactgctacacagcctggc
acaacaatcaaatttaatccaccaactggaagtgacacaatggtcaagagcggtgtgacg
accagcattaacaccaaacaccaatgcatcacagccatgaaggagtacgaaaacaaatcc
ttagaggagctgaggttggaggactaccaagcaggcagaaaggggccctcgaacccaatg
gcagccaacacaggtggcctgtttgggactacaggggcagctactcccagcactgctgct
ggactctttggttcctcagctacaaatactggcttcagctttggccagaataaaacctcc
ttcggcaccagtacaagtggctttggtgcaaccacaagcagtttatttagccagccacaa
cctgctaatagtctcttcaagcccttcggccaggccaccactgcccagaacaccggcttc
tctttcggaaacaccaacaccatgggcctgtttggaagtacggctgccactcagactggt
gggctgtttgggaacacagcgaacaccagtacggccacaggctttggcacaggcacaggc
ctctttgggccgaacaacactgcctttgggaataacttatttggaaataagcctgctggt
tttggcacaaccaccaccagtgcaccctcctttggtacaggtaccggcctgtttggcaac
aagccccccctgactctgggaactaacacaaacacctccaattttggatttggtgccaat
cctgctggagggagtctgtttggaaataaaactgccacgggtggcctagggacaggtcta
ggaacaagttttggagcaggtgtaggcacaggacaaacatctctgtttggaaacaaccag
aacaagatgggttcaactctgggcactgtagggacatttggagctactggattcaataca
ggaaccagtgcactgaactttggagcaccacagcaacctgttgccctgactgaccccaat
gcggcagcggcccagcaggcagtgctgcagcagcagattaatgccctggcttacgcacct
tttggagactcgccccttttcagaaaccctctttctgaccctaagaagaaggaggagcgt
ttgaagcccacaaatccagctgcccagaaagctctgacaacccccactcactacaagctg
acccctcgtcctgcaacacgtgtgcgacccaaggccctcacctcctcaggctctgccaaa
tctcagctctttgatgggctagatgatgatgaaccttcactaaccaatggagcctttatg
cccaggaagagcataaagaagcttgtgctgaagaacctgaatggcagcagtctgtacagc
agtcctctaaacagagagactgatgacttggcctctccttcagagtacccacagaatgga
ctcagtttgagatcagatgcggaggaaaccagagatggagaaatagagaggggagcagaa
gatgatctggaagtgtccaaattttacacaaatcccattgcaaagcccatcccacactcg
cagcccagtccctcactgcaggatactatcactgagctgaacatgcggagaggtgtcagt
gctcgcaatggattggagctcagcagtgaggagatctctttgggagaggactcagttcag
gaggacagagatgaagagctggaagcccagaaacctcctcacccagctggtattgttctc
agccgagtgggctactatacaattccatcaatggaggaacttggaaagatgctgaatgaa
aatggtgactgtattgtggagaacttcactgttggcagaaaaggttatgggtcagttttt
ttccctggtgaagtcaatctgacaaacatgaatcttgatgaaattgtgcacttcagacgg
aaggaggtaattgtctaccctgatgacaaagacaaacctcctgtgggagaaggacttaac
agacgagcagaagtgacccttgatggtgtttggcccaatgacaaaaccacctgcacacaa
atcaagagtcctgagcgtctcagtgaaatgaactacgagggacgattggagaacgcctcc
cgcaggcagggtgctcgcttcctggagtatcggcctgagactggctcctgggtatttgag
gtggcccacttctccaaatacggcctgcaggattcggatgaggaggaggaggttccccca
gcgaagactgacccaaagaaaatgaaaacgacgattcagcccgggctgcaacaacttcca
ccgacccagcagcagatggcaccccaggctcagagcacggcattgttggagcttctcagt
cgtgtgtcggaactggacagtgacatggccgacattacccaggaacaacatgcagatgga
gttttgtgtgaggaggatgagggtgctctagaggaggatgctaagatggcactaagggta
gaaacccctgctgagcatgagcctgtctctgcttccagccagatcgcctcttcgctagga
atcaaccctcacacccttcagattatgaaagcatctctctttgctggggatgatgagtgt
gacccgtttcatgagcagctgcctcagaaaatcttggaggaggttgcgtctcccagggtt
ttacttggtaaaccccaaggcggtctgtcagtgggcagccttctgcagaccaaattcttg
tcaggtggagggctccttgcccatctgccagatgttccttttggagggatccctcagaag
ctcagtaagccagcagtctcggacacaccatggccctcgttgggcccctccttcctcttg
ccacctccagttccagaagtcaccctgcgtacagtaggggctcgcaggctggagggccct
gtgtctcgggagtgctcagttactctggggaaggggcgcctgctgatggatgcagcactg
tacatgggtcgttcctttagggtcggttggggcccaaactggacactggtgcactgtgga
gatccgctcagcacagcgcaagagtcaaaggaacaggccgcagataccatgggattcggc
ttcttgcccaaacctacaaagtccaggcagatcactgaaagcccctttaaagtacatgta
gagcaagtggtgggcatggagcccaagaagacgacagagagcatagctgtctaccaccgg
ccactggaaattgggctcaaacacagcactatcagcactgaagatgcttgccccttcatc
cagcccgaaaaaggagtggaagcactgcacgaatatgctcagtggattgtggaggtcaac
aaagagacaggagatgctgttctgggccactggcagcaggtgtggaccctgtgtgcggct
ttatggggcaggctgggagatcaggacttggaggctgagcacagcgggaattaccaagag
caactggctcgcaggcggagtttctctcgctggctggccgaaagcgcggcccagcggatc
caggaagaagtgggccaagctcagccacacagccaggtggaagccatcttcagctatctg
actggccactgcataagtgaggcctgcagactggctcagaaaagcggagaccatcgtcta
tctctattgctgtcccaagcagtgggctctcagttcagcagagacctcttggctctgcag
ctggcagactggaatagaatgcagacagactccttcattcaggaggagaggctcagaatt
tttgccttactagcaggcaaacctgtgtgggaatcaacagactgctgtataaatgtgtgt
tctgagctggactggaagcgctgcgtggctgtgcacctgtggtacatgctgcctcccact
gcctctgtagcagattctcttgccaaatacgaggctgcattccagggtctggaggacggg
aggaagtatgcttgtgcacctttccctccgtatgtggatgacacagaattgctaggtctg
gatgaggagatggaggacacagaatctaagaaatcgctctatgacatctgcttccacctt
ctcaaactctatagtgtcaagcactacagcctgcagcagctactggatcccagcacggtg
actgcagatcagctggactacaggctgagctggcacctgtggaatgtgctgcaggcttta
aactacacccacctctcactgccacgtcagggcctcctgcacgccagctatgctgctcag
ctcgagagtgcaggcctctgggagatggcggtttttgttttgctgcatatccctgactcc
gcacttcgagagcgtgctgtgcgagagatgttgaaccagcactgcccccttgaggagact
gaggagtctgcagagaaggagcgttttcttacagacaagctgctgatccccatacattgg
atccacgaagccaaggccatccgcgcctgtagggatggagataaacacagagaagcgctg
cacctctacaaggctggccactggaatcactgccaccgactagtcatccagaacctggcc
tcagactgcatcattaatgataatcatgattacctgatggagttcctggaaggtttggca
gtgcctgagcgcagcgtacagatccaagactgggacacgtcaggccgggtctacctggac
tacatccgcgttattcagaccctccaagccattcagcggatggagagtccaggatatgag
ctggagcgtctacacacagatgtaacatctctgtgcagcaggattgaactacttccctgc
tctaaagccaaagacagacttgctcagtcagaaatggccaaacgtgtggctaacatcctg
cgtgtggtgctaagccttcagcagggtggcgagggcactccagacccccgtcacattccc
ttgtgccacttggccccccacatcgggcgcctgcccatgcccgaggactatgctctagaa
gaacttcgcagcctcacccagtcctacctacgggagtacattgttagtcactga
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integrated database retrieval system
