Colossoma macropomum (tambaqui): 118819676
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Entry
118819676 CDS
T09004
Symbol
pdlim4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118819676 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
118819676 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118819676 (pdlim4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
SNAPC3
Motif
Other DBs
NCBI-GeneID:
118819676
NCBI-ProteinID:
XP_036443406
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MPHTVTLNGPSPWGFRLVGGRDFSTPLTISRITPGSKAALGDLCPGDTILAINGDSTETM
THMEAQNRIKACTEELMLDISRSEKKSLSPTVIDDYKTNLYIGAPEAESQNFRPISSGFS
PVPKSLSPQKXATSFVPINNGNSRLVPQYNNPVGLFTNNNGNSALPKHMASLSLSFSNSP
EPAVQYPGVHNGFDTESDVYKMLQDHEKPVSVPKQSGSFKYLQGILEAENGGISPVDRTG
ARGVRSPIRSPILSPITPLAGLQKLPQCTRCGNGIVGTIVKARDKLYHPECFMCDDCGLN
LKQRGYFFIEDNLYCETHAKARVQPPEGYDVVAVYPNSKVEMF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgccacatactgtaactttgaacgggccctcaccgtggggttttcgacttgtaggcgga
cgggattttagcacgccgttgacgatttcaagaataacgcctgggagtaaggcagctctg
ggggacctgtgtccaggagacaccatcttggccatcaatggggacagcacagagactatg
acacatatggaggcccagaacaggattaaagcctgcacagaggagctcatgttagacatc
agcaggtctgaaaagaaaagcttgtctccaactgtaatagacgactacaagaccaatcta
tacatcggagccccagaggctgagtcacagaatttcagaccaatcagcagtggcttcagc
cctgttcccaaaagcctgtccccccaaaagnncgccacctcttttgtgcccatcaacaat
ggcaattcaaggcttgtgccacagtacaacaaccctgttggcctattcacaaataacaat
ggcaacagtgccttacccaaacatatggccagtctcagcctcagcttttcaaacagccca
gagccagcagtgcagtaccctggtgttcacaatggttttgacacagagtctgatgtctac
aagatgctgcaggaccatgaaaagccagtgtctgtacccaagcagtctggctcctttaag
tatttacagggaatactggaggctgaaaatggaggtatttccccagtggacagaactgga
gcaagaggtgtgcgatcaccaatccgatcccctattctcagccccattacccctcttgct
ggcttacaaaagctgcctcaatgcacacgctgtggtaatggaattgttggtaccatcgta
aaggccagagacaagctttaccacccagagtgcttcatgtgtgatgattgtggtctgaac
ctcaagcagaggggctatttcttcattgaggacaacctgtattgtgagacccacgccaaa
gccagagtgcagccccctgagggctatgacgtagtggctgtctaccccaactctaaagtg
gaaatgttctga
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