KEGG   Colossoma macropomum (tambaqui): 118819702
Entry
118819702         CDS       T09004                                 
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03040  Spliceosome
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118819702 (srsf1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118819702 (srsf1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmao03041]
    118819702 (srsf1b)
Spliceosome [BR:cmao03041]
 Common components
  Common spliceosomal components
   SR proteins
    118819702 (srsf1b)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 RRM_7 Nup35_RRM_2 CoV_nucleocap
Other DBs
NCBI-GeneID: 118819702
NCBI-ProteinID: XP_036443462
LinkDB
Position
Unknown
AA seq 241 aa
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGAGGGAGAPRGRYGPPSRRSEYRVIV
SGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEG
ETAYIRVRVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSR
T
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctggcggcggtgtgatccgaggtcctgcaggaaacaacgattgtcggatttacgtc
gggaatttacctcccgacattcgcaccaaggacgtcgaggacgttttttacaaatacggg
gcaattcgtgatatcgacctgaaaaatcggagaggaggaccacctttcgcctttgttgag
ttcgaggaccccagagatgcagaggatgctgtgtatggacgagatggctatgactatgac
ggctaccgtttgcgggtggaattccccaggagtggcagaggtggagcgggaggtggagct
ggagcccctagaggcagatatggcccgccttccaggcgctctgagtacagggtcatagtt
tcaggactccctcctagcggaagctggcaggacctgaaggatcacatgcgtgaagcaggt
gatgtatgttacgctgatgttttccgagatggcaccggtgttgtggagtttgtgcgcaaa
gaagacatgacctacgctgtgcgaaagctggataacactaagttccggtcacatgagggt
gagacagcttacatccgtgtaagggtggatggtccccgcagcccaagttacgggcgctca
cgctctcgcagccgcagcaggagtcgcagccggagcaacagtcgcagccgcagctattca
ccacgccgcagcagaggatccccacgttactcgccccgtcacagccgttctcgatcccgc
acctaa

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