Colossoma macropomum (tambaqui): 118819817
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Entry
118819817 CDS
T09004
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118819817 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118819817 (sart1)
04121 Ubiquitin system [BR:
cmao04121
]
118819817 (sart1)
Spliceosome [BR:
cmao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118819817 (sart1)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118819817 (sart1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
118819817
NCBI-ProteinID:
XP_036443637
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MGSSKKHKEKDKERDPEERHREHKKHRHKERDRDKERDGRDKEKEKRKRSRSRERSGRGE
KESRSKGEKSGGEPRVKKEKVDPGYEESEVTEIAPKSASGDASLSIEETNKLRAKLGLKP
LELNENKKELGTKEEPLLAETINPAQIKQQADIREKLAALKEKRLLNQKLGKVKTLGEEE
PWLDDTASWVERSRKLAKEKEMAEKRAKLLEEMDEEFGVSNLVEQEFAQSKKEAYGSNDL
KGLAVQHKIESFKEGETVILTLQDKGVLEEEEDVLVNVGLVDREKAEKNVELKKKKPDYK
PYDEEESVEDMVMFKPKSVLSKYDEEIEGEKKKSFRLSAGGFVTGERERELQAIRESLHN
QAQTLEMPALTLATEYYTPQELVSFKKTKRRVKKIRKKEKVLSADDVLIDDSRSTDFGSR
TRGRGRRQIDEDGEEEDLAKEDSSSSSKVADVLQQSDDIRMADMDISDDDDLVAPESTAI
EEDEAELELQKQLEKQRKLKQKQMLKDSGEKVAEHLQELVKTRDDEDDPEKKNNIVFNAT
SEFCRTLGDIPTYGLSGNREDQEDIMDFEQEEDREGAGGSNSENDDNVRWSTVNLDEEQK
QPDFATASTTILDEEPIVNSGLAAALLLCKNKGLLDTQVQKVARVRAPKGALPNVNYCIE
DKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGK
GSGKMKTEKRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNAN
TITK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggctcatctaagaaacacaaagagaaggacaaggagagagacccagaggagcggcac
cgggagcacaaaaaacaccgacacaaggagagagacagggataaggagagggatgggagg
gataaggaaaaggagaagaggaaaagatcccgctcccgggagaggagcggccgaggagag
aaggagagtcgcagtaaaggagagaagagcggcggagagccgcgggtaaagaaggagaaa
gttgatcctggttatgaggagagtgaagttacagagattgctccaaaatctgcgagtggt
gatgcttcgctcagcatcgaagaaaccaataagttgagggccaaactgggtctgaagcct
ctggagctgaatgagaacaaaaaagagcttggcacaaaggaggaacccctgttggctgag
acaatcaaccctgcacagatcaaacagcaggccgacataagagagaagctggctgctctc
aaagagaaacgcctgcttaatcaaaaacttggcaaagtgaagacccttggagaggaagaa
ccatggttggacgatactgcttcctgggtggaaaggagtcgcaaactagccaaagagaag
gagatggcagagaagagggccaagctcctggaagagatggatgaggaatttggtgtgagc
aatctggtcgagcaggagtttgcacagagcaagaaggaggcttacggttcaaatgacctt
aaaggtcttgctgtgcaacacaagattgaatcctttaaagagggggaaacagttattctg
actctacaagacaaaggtgttctggaagaggaggaggacgtgctggtgaacgtgggtctg
gtggaccgagagaaagcagagaagaatgtggagcttaagaaaaagaagcctgattacaaa
ccctatgatgaggaggagagtgtagaagacatggtcatgttcaaaccaaagtccgtcctg
tcaaaatatgatgaggaaatagagggagagaagaagaaaagtttccgcctgagtgctgga
ggctttgtaactggggagagagagcgtgagttacaggccattagagagagcctgcacaac
caggcacaaactctggagatgcctgctctcaccctggccacagagtactataccccacag
gagctggtgagcttcaagaagaccaaacgtcgagtgaagaaaatccggaagaaggagaaa
gttctcagcgctgatgacgttctcattgatgactctcgcagcacagactttggctccagg
acacgagggcgagggaggaggcagatagatgaagacggagaagaggaagatcttgcaaag
gaggacagcagcagcagcagcaaagtggccgatgtgctgcagcaatctgatgacattcgg
atggctgacatggatatcagtgatgacgatgaccttgtggctccggagtctacagccata
gaggaggatgaggcagagctggagctgcagaaacagctggaaaaacagaggaagcttaaa
cagaaacagatgctgaaggattcaggagaaaaggtggcggagcatctgcaagaattggtg
aagaccagagatgatgaagatgaccccgagaagaagaacaacattgtcttcaatgccacc
tcagagttctgccgcacactgggagatattcccacctatggcctttcaggcaaccgagag
gaccaggaggacatcatggactttgaacaggaggaggaccgtgagggagctggaggctcc
aattcagagaacgatgataacgtgagatggagcacagttaacctggatgaggagcagaag
cagcccgatttcgccacagcttcaaccaccattctggatgaagagcccattgttaattct
ggcctcgcagctgccttactgctctgcaagaacaaaggattactggatactcaggtgcag
aaggtggctcgagttcgtgctccaaaaggagctctgccaaatgttaactactgcattgag
gataagatggccattgatgacaaatacagcaggagggaggagtacaggggtttcactcag
gacttcaaagagaaagatggatacaagccagacgtcaagattgaatatgtagacgagtct
ggacgcaagctcacacctaaagaggctttcaggcagctctcccaccgtttccatggtaaa
ggctctggcaagatgaagactgagaaaagaatgaaaaagctggaggaagaggcgctgttg
aagaagatgagtagcagtgacactcctctaggcacagtggctctgttgcaggagaaacag
aagtcccagaaaactccctacattgtgctcagcggtagtggaaagagcatgaatgcgaac
accattaccaaatag
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integrated database retrieval system
