Colossoma macropomum (tambaqui): 118819838 Help Entry 118819838         CDS       T09004                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cmao  Colossoma macropomum (tambaqui) Pathway cmao03440   Homologous recombination cmao03450   Non-homologous end-joining cmao04218   Cellular senescence Brite KEGG Orthology (KO) [BR:cmao00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     118819838 (rad50)    03450 Non-homologous end-joining     118819838 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     118819838 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cmao03032]     118819838 (rad50)    03400 DNA repair and recombination proteins [BR:cmao03400]     118819838 (rad50) DNA replication proteins [BR:cmao03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     118819838 (rad50) DNA repair and recombination proteins [BR:cmao03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      118819838 (rad50)     BRCA1-C complex      118819838 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      118819838 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SMC_N SbcC_Walker_B ATG17_like GAS Hydro_N_hd AAA_29 AAA_16 AAA_13 AAA_22 Motif Other DBs NCBI-GeneID:  118819838 NCBI-ProteinID:  XP_036443672 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYVTSGDFPPG SKGNTFVHDPKDAHETDVRAQIRLQFKDVNGEPIAVQRSMLSTQKGKKAEFKTLEGVITR IKHGEKVSLSSKCAEIDREMISSLGVSKAVLNHVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKVLETLRQLRLKQSNTVKACQMELKYLKQNKEKAQEIKDLLSTKEAQLAASKES VQRIESQIDPLENRLNDIDDNLGKVMKLDNDIKALDSRKKQMEDDNRELEEKMEQVFQGT DEQLQEMYQNHQRTVREKERRLTECQRDLERAGRDCQRMNRLKSDLLIEQGRLQMEADRQ ASHVKNRDVQVKSLASYLEMEGYDRAPFNERQLQSFHRQVKERQDNETEALNKVMVDMQE KETQKQQSIDDIRDKKTGLERTIELKRDIQAKKQQELKNIKSDLQRLEGSSSRLQELETE LTKAERDLDNAVQSSTVDSLKVEVQELQREKAELDQAQRRLDQEMETLNMHTTARTQMDM LKKDKTDKEDQVRKIKSRHNEDLVSLLGHFPNKRELEDWIHSKSREINTMREKLGKLNKD LASREQNKSHFTAEIRRKEQQLTSYEEKLFNVCGSQDFESDLSKLRDDLEKCSKQRAMLA GATAVYTQFISQLTEEGEPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKNTEQDLK RKERKRDEMMALKPLRQSLAELQEKELPELRNKLQSVNREIEKLKEDIEEQETMLSMLMS EEDTAKACLQDISLMDRYQMDLKDVERKIAQHAAKLQGVDLNRTMQHVSQEKQETQHRLD TTCSKMELKRKLIQDQQEQIQTLKSSVNEIRAEKLQISSNMQKQQQLEEQCVELTTEIQA LHREIREAKEQVSPLVATLEKLQQEKQELIERRRQKQDEGQERINATKDRIKNLANLERE INRYIEEGKDEYKEQKEAELQETNAQLLEAEKQREKINKDMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVSKKREVLLKEMGNMQVMELRNERRELERKVEDLKKNRSLALGRQKG FEEEILRFRKELREDQYCQAEERFRDKMIVMRTTELANKDLDIYYKALDQTIMKFHSMKM EEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRTYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSNYVEHFYRIKKNQDQCSEITKCSISSLNTYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaaaatagagaagatgagtatccttggcgtgaggagttttggtgtggaggacaag gacaaacaagtgataacattcttcagtcctctgacggtgctagtaggacccaatggagct ggcaaaacgactattattgaatgccttaagtatgtcacttctggagactttccacctgga agcaaaggaaatacgtttgtccatgatccaaaggatgcccatgagacagatgtacgtgcc cagattcgcctgcagttcaaagatgtaaatggggagcctatagccgttcagcggtccatg ctaagcacacagaagggcaaaaaagcagagttcaaaacccttgaaggagtcatcaccaga attaagcatggagagaaggtcagtctgagctctaaatgtgccgagatagaccgtgagatg atctcgtctctaggcgtttcgaaagctgttctcaaccatgtcatcttctgccaccaagaa gagtccaactggccactcagtgaaggaaaggcactgaaacagaaatttgatgaaattttc tctgccacaaggtacatcaaggtgctagaaacccttcggcagttgagactgaagcagtcc aacactgtcaaggcctgtcaaatggagctaaaatatctgaagcagaacaaagagaaggct caggagatcaaggatctgctatccactaaagaagcccaactagcggcttctaaagagagt gtgcagcgcatcgaaagccagattgacccgctggagaatcggctgaatgacattgacgat aaccttggtaaagtcatgaaattggataatgatatcaaggctctagacagccggaagaaa cagatggaagatgacaatcgagaattagaagagaagatggaacaggtgttccagggtaca gatgagcagctgcaagagatgtaccagaaccaccagcgcactgtgagggagaaagagagg aggctcacagaatgtcagcgtgacctagagagggcaggtcgagactgtcagagaatgaac cgcctcaagtcagacctactcattgaacaggggcgtctccagatggaagcagacagacag gcatcgcatgtaaagaacagagatgttcaagtcaagtccctggcatcttatctagaaatg gagggctatgatagagctccattcaatgagcgacaactccagagcttccatagacaggtc aaagagagacaggacaatgagactgaggccctcaacaaggtcatggttgacatgcaagag aaggagacacagaagcagcagagcattgatgacatccgtgataagaagacggggttggag agaaccattgagctgaagagggacatacaggccaagaagcagcaggagctgaagaacatc aagtctgacctgcagagactggaaggctcctcctccagactgcaggagctggagacagag cttacgaaagcggagcgagatctggataatgctgtgcaaagctctacagtggacagtctg aaggtagaagtgcaggagctgcagagagaaaaagcagaactggaccaggcccagcgtaga ttggaccaggagatggagacactcaatatgcacaccacagcacgcacgcagatggacatg ctcaaaaaggataagacagataaagaagatcaagtaaggaagattaagtccagacacaat gaagacctagtttctctgctgggccacttccctaataagagggagttagaggactggatc catagcaaatccagagagatcaacacaatgagagagaagctgggcaagctcaataaagat ttggcatccagagagcagaataagagtcactttacagctgagattcgtcgcaaagagcag cagctgaccagctatgaggagaagctcttcaatgtatgcggcagtcaggactttgagtct gacctaagcaaactgcgggatgacctggagaaatgctccaaacagagagccatgctggcg ggagccacggccgtgtacactcagttcatcagtcagctaactgaggaaggcgagccttgc tgtccggtgtgtcagcgcatctttccctctgaggccgagctccaggacgtcattaacgac atgcagtccaaattgcgtctggttcccgataagctgaagaacactgagcaggacctgaag aggaaggagcgcaagcgtgatgagatgatggccctcaaacctctcagacagtctctagcg gagctgcaggagaaggaactgccagagctgaggaataagctgcagagtgtgaaccgtgag atagagaaattaaaggaggacatagaagagcaggagactatgctgtccatgttgatgtca gaggaggacacagccaaggcctgtctgcaggacatttcccttatggaccgctaccagatg gacctgaaggatgtggagagaaagatagctcagcacgcggccaagcttcagggagtggat ctgaaccggactatgcagcatgtcagccaagaaaagcaggagacccagcatcgtctggac accacatgcagtaagatggaacttaagcgcaaacttatccaggaccagcaggagcagatc cagaccctgaagagcagtgtgaatgaaatacgtgcagaaaagctccaaatctccagtaac atgcagaagcagcagcagctggaagaacagtgtgtggagttaaccactgagattcaggca ctgcatagagaaatacgggaagcaaaggagcaggtgtctccactggtggccactttggag aagctccagcaggaaaagcaggagctgattgagaggagaaggcagaagcaagatgaaggc caggaaaggattaacgctacaaaggacaggattaaaaacttggccaatcttgaaagagaa attaacaggtatattgaagagggcaaggatgagtacaaggagcaaaaagaagctgaactt caggagacaaatgcccagctgcttgaagctgagaaacaacgggaaaagatcaacaaggac atgggcaatatccgacaggacatagacactcagaaggtccaagagcgttggcttcaggat aacttgacactaagaaagcgtgtggaggaactgaaggaggtgtccaagaaaagggaggtc ttactcaaggagatgggcaacatgcaagtcatggagttacgcaatgagcgtcgagagttg gagcggaaggtggaggatttgaaaaagaaccgcagtttggcgttaggccgacagaagggc tttgaggaggagatcctgcgcttccgcaaggaactccgtgaggaccagtactgccaggcc gaggagagattccgggacaagatgatagtcatgagaaccactgagctggccaacaaagac ttggacatctactacaaggcattagaccaaacaatcatgaagtttcacagcatgaagatg gaagagatcaacaaaataatccgagacctgtggagaagcacatatcgtggacaagatatt gagtatgtggagatccgttctgatgtggatgagaatgcttctgctggagtcaaaagacgc acatataattatagagtagtgatggttaaaggagacacagctttagacatgcgcggacgt tgcagtgctggtcaaaaggtgctggcctccctcatcatccgactggcactggctgagaca ttctgtctgaattgtggcattctggccctggatgagcccaccaccaatctggacagagaa aacattgagtccctggcccacgccttggtggaaatcataaagagtcgttctcggcaacgc aacttccagctgctcatcatcacccacgatgaggactttgtggagctactgggtcgctcc aactatgtagagcacttctacagaatcaagaagaaccaggaccaatgctctgagatcacc aagtgcagcatctcaagtttaaacacctacctgcactga

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