Colossoma macropomum (tambaqui): 118819848
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Entry
118819848 CDS
T09004
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118819848 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118819848 (uimc1)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118819848 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
118819848
NCBI-ProteinID:
XP_036443684
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MPRRKRTTPQNEGRRKLRRTDDNQDEDTLVISDSENEQEENNVIKMSPREARRRERENRS
QMQDMTEEEMLDLAMRLSKQEASSAAQRQQLEDDDMRKAIAESLHVSQSQALEVTSEPAS
STAKLSQDPATVTTHLRRKLSFPCKTEMTRAGDDEVTPAAESGEDSMQDIKPLPPMPDLS
QKTLSQPSPPSPCLPPVPFTASQECLSTQWKDPDEQVLKTDSPKDEPSQGDSQAQSSPIF
LQQCSIRLSQDAMITSRASWNPPSMQDSSLSLTCPDSSQLTHQQSPSPYKSPVFAQTDPK
GSIELTKDKVSCTSKDNFIGKVCTPNEEEDSEKVNESSSHKKQLHESRDPRKRLSLYRKS
QPSPHTSVPDDGVGPEQETVQPKQLKDDPGHRASSNAVLESQSVEEFTSHMVLHLSDDDD
DDEEEEKVVDPSPVFHQEHVLHPDHSRLSPTQPCCSPPTVTTTQNCSCTPGHSTQDSDSR
HVCVRRKFTSKTTYPAESDQLEVGFLKKPACDSKPTHLMEGKGNGLVSYYWGVPFCPRGQ
SPDDYTGVILSQLEVYEKSLKEAQRQLLHKAEWSLPLFPCPAERPFGRRMKRHRAPQLLE
EEEDEEPEKMVEEKKKKLDEEEEEDRAESRGGSEKEVEHGQSETYVVVSSPETQVELAQN
SPLLIGQHGSLDAVKPSRIFYSCRKSGPQDLSDDTQIQQPDEHEDIQNENYDEENTVCPE
TQMTEDNTPELMVTSPAQPQSRAESEVMEVDEGEAAEEERMEQEQAAEEEEQQQNESAPA
QSQKVECPMCSRLFPIGKIEVHAAYCDGNTEDQEQQDDLSQTVTLRKRTKRIPTEETLSG
SENRSEQREKCYLCQKFFPSKQYSHHVEKCLLQKGPRNNQGNGLLSALHQAERVHLDDDD
DDDGAGPSNVTNKNHGGLADSSEVAEAGGNGNCPASGFYVSSSPIKSFTSISEAADCLID
FQQQYSARSSQRLGRKRKFKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaggaaacggaccacacctcagaacgaaggacggagaaaacttcgtcgcact
gatgataatcaggatgaggacacgttggtcatctctgactccgaaaacgagcaggaagaa
aataatgtcatcaaaatgtcaccaagggaagcccggaggagagagagggagaacaggtca
caaatgcaagacatgactgaggaagagatgttggacctggctatgaggctaagtaaacaa
gaggcaagcagtgctgcccaaagacaacagctggaagacgatgacatgagaaaagccatt
gccgaaagtcttcatgtcagccaaagccaggctttggaagtgacctctgagccagctagc
tctacagcaaagcttagtcaagacccagccactgtgaccacacatttgagacgcaagctc
tccttcccctgcaagactgagatgaccagggccggtgacgatgaggtcactcctgcagct
gaaagtggcgaggacagcatgcaggatattaagccactgccgccaatgcctgatctttct
caaaagaccttgtcacagccctcacctccaagcccatgtctgcctcctgtgccttttaca
gcttctcaagaatgcctctctacacagtggaaggacccagatgaacaagtacttaaaaca
gactctccgaaggatgagccttcacagggtgactctcaggcccagagttcccctattttt
cttcagcagtgcagtataagactgagccaggatgcaatgatcaccagcagagcttcatgg
aatcccccgtcaatgcaggacagttctctcagcttaacctgtcctgatagctcccagctc
acccatcagcagagcccgtccccttataaaagccctgtttttgctcagacagaccctaaa
ggaagtattgaattgactaaggacaaggttagctgtacctctaaagataattttataggc
aaagtatgcacacctaatgaagaagaagactcagaaaaagttaacgaatcttcaagccat
aaaaaacaacttcacgaaagcagggatcctcgaaaacgcctttcactctacaggaagtct
cagccttcacctcacacttcggtgcctgatgatggtgttggtccagagcaggaaactgta
cagccaaaacagttgaaggatgaccccggtcatagagccagctcaaatgctgttcttgaa
agccaatctgtggaggagttcactagtcacatggtcctgcatttgtctgatgatgatgat
gatgatgaagaggaggagaaggttgttgatccgagccctgtcttccaccaggagcatgtt
ctacatccagaccattcaaggctctctccaacccagccctgctgctccccacctactgtc
accactacacaaaactgctcctgtacacctggtcactccacacaagactctgattcccgg
catgtatgtgttcggaggaaattcacctccaagaccacttatccagccgagtctgaccag
ctagaagttggcttcctcaaaaaacctgcctgtgattctaaacctacacacctgatggaa
gggaaagggaatggtctggtgtcatattactggggagtccccttttgccccagggggcaa
agcccagatgattatacaggagttatcctcagccagttggaggtgtatgagaagagtctg
aaagaagcccagcgccagctcctgcacaaagcagagtggagtctgccactgttcccatgc
ccagcagagaggccatttggtaggagaatgaagcgccacagagcccctcagcttctggag
gaggaagaggatgaagagccagaaaaaatggtggaagagaaaaagaaaaaattggacgag
gaagaggaggaggacagggcagaatcccggggaggttcagaaaaagaagtggaacatgga
cagagtgaaacatatgtggtggtgtcctctcctgagacgcaggtggagcttgcgcagaac
tcccctttgctcattggacaacatgggtctttagatgccgttaaaccttccagaatcttt
tatagttgtaggaagtctggtcctcaggatctttctgacgacacccagatccaacagcct
gatgagcatgaagacatacaaaatgaaaattatgatgaggagaacactgtgtgtccagaa
actcagatgactgaagacaacacaccagagctaatggtgaccagtcctgcgcagccgcag
tcacgggcagagagtgaggtaatggaggtggatgaaggagaagctgctgaagaggagaga
atggagcaagagcaggcagcggaggaggaggagcagcaacaaaatgagtcagcacctgct
cagagccagaaagtggaatgccccatgtgttctcgcctctttcccatcggcaagatcgag
gtgcatgctgcctactgtgatggcaacacagaggaccaagaacaacaggatgacctttca
caaacagttacactgcgcaagaggaccaaaagaataccaacggaagagaccttgtcggga
tcggagaacaggtcagagcagcgagagaaatgctacctgtgtcagaagtttttcccatcc
aagcagtacagccatcatgtggaaaagtgccttctgcagaaaggacccagaaataatcag
ggaaacggtttgctctctgccctacatcaggcagaacgagtgcatttagatgatgatgat
gatgatgacggagctggaccgtctaatgttacaaacaaaaaccacggtggccttgcagac
tcgtcagaggtggctgaagctggtggaaatggaaactgtccagcatcaggcttttacgtg
agctcgtctcccatcaaatccttcacctcaatatccgaagctgcagactgcctcatagac
ttccagcagcagtactcagccaggtccagccaaagacttgggaggaaaaggaaatttaag
agatag
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integrated database retrieval system
