Colossoma macropomum (tambaqui): 118820182
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Entry
118820182 CDS
T09004
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118820182 (irx1a)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118820182 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Pox_F17
Motif
Other DBs
NCBI-GeneID:
118820182
NCBI-ProteinID:
XP_036444242
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGAERAAVLAPSSRGGSGEAGAGAPVASVLGVYAHPYAHPNY
GAFLPYASADLALFSQMGSQYDLKDSPGVHPASFAAHTPPAFYPYGQFQYGDPARPKNAT
RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGA
RSKEDEEGNVYGSDNEGEHEKNEDEEEIDLESIDIDKIDENDEGEQSHDDEDEQADKAER
KRRALVFDPSKGTRQELNNNNNNDDNNSSSSSSSSNSTRVSSPGGQGSFQLQVGNKPKIW
SLAETATSPDSSRKPASPCGPTNQVSPQMQHPAFLSSHGLYTCQIGKFHNWTNGGFLGQN
ALLNVRSLLGVNQHHHHNHHGQQQQQQVTATDGDKSPEDLSPKHIDRGIVLRNESPTQHH
TNTLKSSFRPLHESPRRNPQEVSLSLSSA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttccccagctgggctacccgcagtacctgagcgcctctcaggccgtgtacgga
gcggagagggcggcagtgttagccccgtcctcccgcggagggagcggggaggcaggcgca
ggcgctcctgtggcctcggtgctgggcgtctacgcgcacccgtatgcgcaccccaactac
ggagccttcctgccctacgccagcgcggacctggctctcttctctcagatggggtctcag
tatgacttaaaggacagccctggcgtgcaccccgccagctttgctgcccacacgcctcca
gccttctacccttatgggcagtttcagtatggcgaccctgctaggcccaagaatgccaca
cgggagagtacgagcacgctgaaggcctggctgaatgagcacaggaagaacccctacccc
accaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtctcc
acgtggttcgccaacgccaggaggagactcaagaaggagaacaaggtgacgtggggtgcc
aggagcaaagaggacgaggagggcaacgtgtatggcagcgacaacgaaggggagcacgag
aagaacgaggatgaggaggagatcgacctggagagcattgatatcgacaagatcgacgag
aacgacgagggggagcaaagccacgacgacgaggacgagcaggcggacaaggccgagagg
aagaggagggctctggtctttgacccctccaagggaacccgccaggagctaaacaacaac
aacaacaatgacgacaacaacagcagcagcagtagcagcagcagcaacagcaccagggta
tcgtccccgggtggacagggcagtttccaacttcaagtgggcaacaaacccaaaatctgg
tctttagcggagactgccacgagtccggacagctcgaggaagcccgcgtcaccctgcggg
ccgaccaatcaggtgtcgccccagatgcaacacccggccttcctctccagccacggactg
tacacatgccagattgggaagtttcacaactggacaaacggagggttcctggggcagaac
gccctcctgaacgtcaggtccctgctgggggtcaatcagcaccaccaccacaaccaccac
ggccagcagcagcagcagcaagtgactgcaacggacggagacaagagcccagaggacctc
agtccaaaacacatagatcgaggaatcgttcttagaaacgagtcaccaacacagcatcac
accaacactttgaaatcatcgtttcgcccacttcatgaaagtcccaggaggaatccgcag
gaagtctctctctcgctctcttctgcttga
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