Colossoma macropomum (tambaqui): 118820351
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Entry
118820351 CDS
T09004
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118820351 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118820351 (prpf31)
Spliceosome [BR:
cmao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118820351 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
118820351
NCBI-ProteinID:
XP_036444551
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPGGEGEGSDEEGRDREANGGLDDIPEEMELDYSGTES
VASIAKLRNSKSFSEIMEKISQYVGNPRKNTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNEILQQILTNATIMVV
SVTASTTQGTLLGEEELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRKTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLAARVDSFHESPDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DPSRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKREGDGKV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagatgagctgctcgctgatttggaggaagcaggagatgaaggcgaggat
gggctgtacccaggtggggagggtgaggggagtgatgaggaggggagggacagggaggcc
aacggagggctggatgacataccggaggagatggagctggactacagcgggacagaaagc
gtggcgtccatagcaaaactacggaacagtaaatcgttttctgaaatcatggaaaagatt
tcgcagtatgttgggaatccacgcaagaacacagatgtgtccggccctgtggaggcagac
cccgagtacaggctcatcgtcgctgccaacaacctgactgtggaaatcgataatgaattg
aatatcattcacaaatttgttcgtgacaaatactccaagagattcccagagctagagtca
ctggtgcccaatgccctagactacattagaacagtcaaggagctggggaataacctggaa
aaatgtaagaacaatgagattctgcaacagatcctgactaacgctaccatcatggtggtc
agtgtcactgcctccacaacacaggggacattactgggtgaagaggaactccagcgattg
gaggaggcatgtgacatggctctggagctcaaccagtcaaaacacaggatctatgagtat
gtggaatccaggatgtccttcattgctcctaatctgtccatcatagtcggggcatccact
gctgccaagataatgggtattgctggaggactgactaacctgtccaagatgccagcatgt
aacctgatgctcttgggtgctcagaggaaaaccctgtcaggtttcagcagcacctctctg
ctccctcacactggctacatctaccactgtgatgtggtgcagtctcttccgccggacttg
aggaggaaggcagcgcggttggtgtcagccaagtgtacactagcagctcgtgtggacagt
tttcacgagagtcctgatggcaaggttgggtatgacctaaaggaggaaattgaacggaaa
tttgataagtggcaggagccaccgcccgtcaaacaagtgaagccccttccagcaccactg
gacccctcgcggaaaaagagaggaggcagaaggtatcgtaagatgaaggagaggttggga
ctcactgagatcaggaaacacgcaaacagaatgacctttgcagagattgaggatgatgca
tatcaggaggatctgggcttcagtctgggtcagctggggaaatctggcagtggcagagtg
agacaggcgcaggtcaatgacgccacaaaggcccgcatctccaaatctctgcagcggacc
ttgcagaagcagagcatgacctatggtgggaagtccacagtcagagacagatcttcagga
accagctccagtgtcgctttcaccccactacagggtttggagatcgtcaacccacaggct
gcagaaaagaaggtggctgaggcaaaccagaaatacttctctaatatggcagagttcctc
aaagtcaagagagagggagatggcaaagtgtga
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