Colossoma macropomum (tambaqui): 118820380
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Entry
118820380 CDS
T09004
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a
KO
K24901
homeobox protein orthopedia
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118820380 (otpa)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118820380 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF4276
AIF_C
DUF7500
Spt20_SEP
DUF702
Presenilin
Motif
Other DBs
NCBI-GeneID:
118820380
NCBI-ProteinID:
XP_036444585
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MLSHADLLDARLGMKDAAAAELLGHREALKCRLAGGADPAGHPGELAPGSDAVEGATLLP
GDDIGVVGSNAAGVPVNGKEQDKQQQQHQQHQQQQQQQQNPSQQNPQKQKRHRTRFTPAQ
LNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTL
LPTHHGLPQFPGAAMGDGLCSFHANDTRWAAAGMPSVSQLQLPPALGRQQAMAQSLSPCS
LGAGPPPNSMGLSNMSSNGSSLQSHLYQPAFPGMVPASLSGPTSAAAAAAVAASGSPQLC
SSPDSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgatctgctggacgctcgcctcgggatgaaagatgccgccgcggcc
gagctgctcggacacagggaggcgctgaagtgtaggctcgccggaggagctgaccccgcc
ggacaccccggagagctggcgccgggctcggacgcggtggaaggcgccacgctgctcccg
ggagacgacatcggcgtggtaggctcgaacgccgcgggagtgccggtgaacgggaaggag
caggacaagcagcagcagcagcatcagcagcaccaacagcaacagcagcagcagcagaac
cccagccagcagaacccccagaaacagaaacgccaccgcacgcgcttcaccccggcgcag
ctcaacgagctcgagcgcagcttcgccaagacgcactacccggacatcttcatgcgcgag
gagctcgcgctgcgcatcggcctcacggagtcccgcgtgcaggtgtggttccagaaccgt
cgcgcgaagtggaagaagcgcaagaagacgacgaacgtgttccgcgcgcccggcacgctg
ctgcccacgcaccacggcctgccccagtttcccggagccgccatgggcgacggcctgtgc
tccttccacgccaacgacacgcgctgggcggcggcgggcatgccgagcgtgtcccagctg
cagctgccccccgcgctcgggcgtcagcaggccatggcgcagtcgctgtccccgtgcagc
ctgggcgcgggcccgccgcccaactccatgggcctgtccaacatgtcgtccaacggctcg
agcctgcagtcgcacctgtaccagcccgccttccccggcatggtgcccgcctcgctctcc
ggaccgaccagcgcggcggccgcggcagcggtggcggccagcggctccccgcagctctgc
agctcgccggacagtgacatgtggaggggcacgagcatcgcgtcgctgcgccgcaaagca
ctcgagcacacggtgtccatgagcttcacctaa
DBGET
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