Colossoma macropomum (tambaqui): 118820407
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Entry
118820407 CDS
T09004
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03030
DNA replication
cmao03410
Base excision repair
cmao03420
Nucleotide excision repair
cmao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118820407 (rfc2)
03410 Base excision repair
118820407 (rfc2)
03420 Nucleotide excision repair
118820407 (rfc2)
03430 Mismatch repair
118820407 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmao03032
]
118820407 (rfc2)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118820407 (rfc2)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118820407 (rfc2)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118820407 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
118820407 (rfc2)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118820407 (rfc2)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118820407 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
118820407 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_18
MipZ
AAA_5
ABC_tran
AAA_28
DNAX_ATPase_lid
AAA_23
AAA_25
AAA_30
MeaB
NTPase_1
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
118820407
NCBI-ProteinID:
XP_036444623
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MDVDMKEADGEQIQPDTQNKKEDVVSKPATSTYELPWVEKYRPMKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGFINSENVFKVCDEPHPLLVKNMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFR
VCKTFQMPEYLKLEYIKEIGYTHMKIAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatatgaaagaggctgatggcgaacaaatccagccagacacgcagaataaa
aaggaagatgttgtctcaaagccagcgacgagtacttacgaactaccatgggttgaaaaa
tacagacctatgaagttgaatgaaattgttggaaatgaggaaactgtcagcagactggag
gtgtttgccagggagggcaatgtacccaacataatcattgctggtcccccaggcactgga
aaaacaacaagcattttatgtttggcaagagctcttcttggcccagcaatgaaggatgct
gtgcttgaactgaatgcctcaaatgacagaggtatcgatgttgtcagaaacaagataaag
atgtttgcccagcaaaaagttactctccccaaagggcgtcacaaaatcataattctggat
gaagctgacagcatgacagatggagctcagcaggctctgagaagaactatggagatctat
tcaaagaccactagatttgccctggcctgcaatgcgtcagacaagattatcgagcccatt
cagtcccgctgtgcagtgctgcgctacagtaagttgagggatgagcagatcatgatgcgg
ctgatggaggtggtggagaaagagaacctgcacaccaccaatgatggcttggaggccatt
atcttcactgcccaaggagatatgagacaggcactgaacaacttgcagtctacaaattct
ggatttggttttatcaacagtgaaaatgtattcaaggtatgtgatgagccacaccctttg
ctggtaaaaaacatgctcgaacactgtgtcaacgctaatatcgacgaagcttacaagatc
attgaacagctttggtctcttggctattctcctgaggacataatagggaacatcttcaga
gtgtgtaaaaccttccaaatgccagagtacttgaaactggagtatatcaaggagattggc
tacacacacatgaagatagcggaaggagtaaactcccttttgcaaatggctggactccta
gggcgactctgcagtaagactgctgcacccgatgccagctaa
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integrated database retrieval system