Colossoma macropomum (tambaqui): 118820464
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Entry
118820464 CDS
T09004
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmao03009
]
118820464 (ddx52)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118820464 (ddx52)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
90S particles
Helicases
118820464 (ddx52)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CDC45
AAA_19
Potyvirid-P3
Motif
Other DBs
NCBI-GeneID:
118820464
NCBI-ProteinID:
XP_036444716
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MDAVDLFRKLGAGAKFDFKRFGKDAERFKVARSQSKDVSKPLEGFNFFGINTREEAAVHD
DENEEEESEEEQSAVTQKRKHSNKDESLSKPRKKQKANKEETNNAENKTDGGEEEELENR
GIQWLSSQDKKAKGPKTKAKDKLSMKRLKQLHSEKVNQIRHSNRINVHGTDVPDPLSTFE
ELQKEYGLDPRIIQNIKAAGFQTPTPIQMQAIPLMMHRREILACAPTGSGKTMAFCLPLL
VHLRQPLNKGFRALIVAPTRELASQTHRELLKLSEGVGFRVHMINKGVDAAKKYGPKSAK
KFDILVTTPNRLIYLLNQDPPAVDLSSVEWLVVDESDKLFEDGKSGFRDQLATIFLACSS
PKICRAFFSATFTTEVEKWCKLNLDNLVCVNIGPRNSAAETVEQELLFVGAENGKLLAMR
DLIKKGFMPPMLVFVQSIERARELFHELVYEGINVDVIHADRTQQQRDNVISSFRSGKIW
VLICTALMARGIDFKGVNLVVNYDFPTSAVEYIHRIGRTGRAGHKGKAITFFTEADKPLL
RSIATVIKQAGCPVPDYMIGFKKIKSKVKRQLEKKPPRRSTIRTMPRFLIKKKPDKRKRK
ERKVEAHSKANGVKPEESTNN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtggacctgttcagaaagctcggagctggagcaaagtttgatttcaagcga
tttgggaaagatgcagaaaggtttaaggtagcgaggtctcagagcaaagacgtttctaag
cccttagaggggtttaacttctttggcatcaacacccgagaagaggcagctgtacacgat
gatgagaacgaagaagaagagtcagaagaggaacaatctgctgtcacacaaaaacggaaa
catagcaacaaggatgaatcgttgagcaaaccgaggaagaaacagaaagcgaataaggaa
gaaactaataatgcagaaaacaagactgatggtggtgaggaggaagaacttgagaacagg
gggattcagtggctgtcatcacaagacaagaaggcaaaagggcctaagacaaaggccaaa
gacaagctctcaatgaagagattaaaacagcttcacagtgagaaggtcaatcagatcagg
cacagtaacaggataaatgtgcatggcacagatgtcccagaccctcttagcacgtttgaa
gagcttcaaaaggaatatgggctggacccaaggatcattcagaacatcaaagcagcaggc
ttccaaacgcccacacccattcaaatgcaggccataccactcatgatgcataggcgagag
atcctggcatgtgcccccactggctctggtaagaccatggccttctgcttgcccttgctg
gtccacctccgccagccactcaacaagggctttagggccctcatcgtagcccctaccaga
gagttagccagccagacgcacagagagctgctcaaactatcagagggagtgggcttcaga
gttcacatgatcaacaaaggagtggatgcagccaaaaaatatggtcccaagtcagctaag
aagtttgatatactggtgactactcctaacaggctgatctatctgctcaaccaggaccca
ccagctgttgatctcagcagtgtggagtggctggtggtggatgagtctgataagcttttt
gaagatggcaaaagtggcttcagggatcagctggccacaatcttcctggcctgctcctct
ccaaagatctgccgagcattcttcagtgccaccttcaccacggaagttgagaagtggtgc
aaactcaatctggacaaccttgtctgtgttaacattggacccaggaactctgctgcagag
acagtagagcaggagcttctgtttgtaggcgcggaaaacggcaagctgctcgccatgagg
gacttgattaaaaagggttttatgccccccatgctggtgtttgtacagtccattgaacga
gcccgagagttgttccatgagttggtgtacgagggcattaatgtggacgtaatccatgct
gaccgcacacaacaacagagggataacgtaataagcagtttccgctctggtaagatctgg
gtgctgatctgcacggctctaatggcccgaggtatcgacttcaaaggggtcaacttggtc
gtcaattatgactttcccaccagcgctgtggagtacatccaccggataggccgcacagga
agagcaggccataaggggaaagccattacatttttcacagaagctgacaaacctcttttg
cgcagcattgccacagtaataaaacaagctggatgtcctgtgcctgactacatgattgga
ttcaagaaaataaaaagcaaagtcaaacggcagcttgagaagaagccaccaaggaggtca
acaatccgcacaatgcctcgctttctcatcaaaaagaaacctgacaagcggaaaagaaaa
gaaagaaaagttgaggcacactcgaaagcaaatggagtaaaaccagaagaaagtacaaat
aactga
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