Colossoma macropomum (tambaqui): 118820609
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Entry
118820609 CDS
T09004
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118820609 (supt6h)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118820609 (supt6h)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118820609 (supt6h)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118820609 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
HHH_9
S1_RRP5
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
118820609
NCBI-ProteinID:
XP_036444879
LinkDB
All DBs
Position
Unknown
AA seq
1731 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDEDEEEEENTEDQDEHGNLRGLIDDGSD
EGEEEGEEEEEEENKSAGGDSDSGEEVRRRRRKRVFDDGLDDDDLDLIEENLGVKVKRRK
KKYSRVKTMDDEGEDDEKDLIADEIFTGDGDGEGEEGEAVERRRPGDDEEEEEDEESDID
DFIVDDDGQPITKKKGKKFTGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDD
EAWDRPKKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAE
DDELEEEAEWIYRNAFSTPTISMQESADYLDRGTTTNFSRRGPSTIAKIKEALNFMRNQH
FEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISA
DPDKPLADAVRPLDTADMERLKDVQSMDELSDVYNHFLLYYGRDIPRMQNAAKATKKKLK
KIKEVSEEDGEEAEVEEEEEEEEEEQKGPDLKQASRRDMYSICQSACLDGLAKKFGLTPE
QFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFNTPEAVLEGTRYMVAMQIAREPLVRH
VLRQTFQERAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEDEGL
LTIDICIDLVGVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRMLAIERALQQFLYPQ
MAKELKNKLIAEAKENIVKSCCRKLYNWLKVAPYRPDQQIEEDDDLMDETQGKGIRVLGV
AFASGRDTPVFCALINGEGEVVDFLRLPYFLKRRNAWREEEREKKLQDIENLKKFLLSKK
PHVVAVAGENRDAHMLMEDIKRTVAELEQDSSLPAVGVELVDNELATLYMNSKKSETDFR
DYPPLLRQAVSVARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLSALYCEFIN
RVNEVGVDVNRAIAHPYTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMG
PKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDAN
PAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPP
NTEEVFNMLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQD
NFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVMGFIPTKFLSDKVVKHPEERVKVGMTVH
CRIMKIDIEKFNVDLTCRTSDLADKNNEWKLPKDTYYDFDAEAEDVKHDEEQKKKQQRTT
YIKRVIAHPSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVR
EEGKENAFSLGHTLWINNEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRKKME
ELLIRTKKEKPTFIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTV
NGLFRWFKDHYQEPVPGVTPSSSSRTRTPASVNATPANINIADLTRAVNSLPRNMTSQMF
NAIAAVTGQGQNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPMMTPS
YSYTTPGQQQAMTTPQYTSSTPQSSHGHHQHPSSTPSSSSSRVRTPQPKTSTHTAVDWGK
MAEQWLQEKEAERRRQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcattgaaagtgaggctgaggagtctgaggaggagtttgaggagaaggac
ctgaaacccaagaagacacagaggtttatggaggatgatgaagatgaagaagaagaggag
aacacagaagatcaggatgagcatggaaacctgagagggctcattgatgatggcagtgat
gaaggagaggaagagggagaggaagaggaggaggaggaaaacaaaagtgcaggaggagac
agcgactctggagaggaggtccgtcgccggcgcagaaagcgtgtttttgatgatggctta
gatgatgatgatctggaccttattgaagagaacttgggggtcaaagtaaagaggaggaaa
aagaagtactcacgagtgaaaacgatggacgatgaaggtgaagatgatgaaaaagaccta
attgcagatgagatctttactggagatggtgatggagagggagaagaaggagaagctgta
gaacggcgccgtccaggagatgacgaagaagaggaggaggatgaggaatcagacatagat
gatttcattgtggatgatgatggacagcccattacgaaaaagaaggggaagaaatttact
ggatacactgatgctgctttacaagaagctcaggagatttttggtggcgacttcgacttt
gctgaatttgacactgaggcatatgatcatgctgaggaggaggaggaggaccaggatgat
gaagcatgggatcgaccaaagaagcagaccaagaggagagtgggccgccgcagcatcttt
gaaatctacgagcccagtgagctagagagcagccacatgactgaccaggacaatgaaata
cgttccacagacatgccagagagattccagttacgtgctatacctgtgaaacctgctgag
gatgatgaactggaagaagaggctgaatggatctatagaaatgcgttctccaccccaacc
atctccatgcaggaaagcgcagactacctggatcgtgggaccaccactaactttagcagg
agaggccccagtaccattgcaaagatcaaagaggcccttaacttcatgaggaaccaacac
tttgaggttccgttcattgcattctacaggaaggagtatgtggaaccagagctcaacatt
aacgatctgtggaaggtgtggcagtgggatgagaagtggacccagctgaaaacacgtaag
cagaacctgacacgtcttttccagaggatgcagtcatatcagtttgagcagatctcagct
gaccctgataaaccactggctgatgctgttcgtcctttggacactgctgacatggaaagg
ctgaaagatgtccagtctatggatgagctcagtgacgtctacaaccactttctgctttac
tatggacgagacatccccaggatgcagaatgcagccaaagccaccaagaagaaactgaag
aagatcaaggaggtgtcggaggaagacggtgaagaagctgaggtggaagaagaggaggag
gaggaggaagaggagcaaaagggaccagatcttaaacaagcctcccgcagagacatgtac
agcatctgccagagtgcttgccttgatggactggccaagaagtttggtctcactcctgag
caatttggtgaaaacttgcgtgacagttaccagagacacgagaccgaacagttccctgca
gagcctttagagctggcaaaggactatgtatgcagccagtttaacacaccagaagctgtc
ttggaaggcacacgctacatggttgccatgcagattgcccgtgaacctcttgtcaggcat
gtgctgagacaaaccttccaggaaagggccaaaatcaacattaagcccactaagaagggc
aagaaggacgttgacgaggcacactatgcatattcattcaagtacttaaagaacaagcct
gtgaaggagctgagtggagaccagttcttgaagatgtgcttggcagaggatgaaggccta
ctcactatagacatctgcattgacctggttggagttaaagggtatgggggtgaccagacc
tactttgacgagatcaagcagttctactacagagacgagttcagtcaccaagtgcaggag
tggaacaagcagcgaatgttggccatagagcgtgccctccagcagttcctctatcctcag
atggccaaggagctaaagaataagctcattgctgaggccaaggagaacatagtcaagtct
tgctgcaggaaactgtataactggctgaaggttgcgccgtatcgtccagaccaacagata
gaagaggatgatgacctgatggatgagactcaaggcaagggcatccgtgtgctgggagtg
gccttcgcctctggcagagacactcctgtgttctgtgcgctcatcaatggtgaaggagag
gttgtggatttcctccggcttccttatttcttaaagaggaggaatgcatggagagaggaa
gaacgagagaaaaagcttcaagacattgaaaacctgaagaaatttcttcttagtaagaaa
ccacatgttgtggctgtggctggtgaaaatcgggatgctcacatgctgatggaggacatc
aagcgtacagttgctgagctggagcaggattcctctctgcctgcagtgggagttgagctt
gtggacaacgagttggctacactgtacatgaacagcaaaaagtctgagacggacttcagg
gactaccctccccttcttcgtcaggctgtgtctgtagcccgtaagattcaggatcccctg
gtggagtttgcccaagtgtgcagcagcgatgaggacatcctgtgcctcaaactgcatcca
ctacaggaacatgtggtaaaggaggaattgctgagtgctctgtactgtgagttcattaac
cgggtgaatgaggttggtgtggatgtgaatcgagccattgctcatccttatacacagagc
ctggtccagtacgtgtgcggcttgggaccaaggaaaggttcacatctgctcaagattctg
aaacagaacaatactcgtctggaaaatcgaacacagttggtcaccatgtgccatatggga
cccaaagtgttcatcaactgtgctggctttatcaagattgacactgcttctctcggagac
agcactgactcctacatcgaggttctagatggttctcgtgtgcatcctgagacttatgaa
tgggcacgtaaaatggcagtggatgctctggagtatgatgagtcagcagaggatgctaac
cctgctggagcgttagaggagatcctggagaacccagagaggctgaaagacttggacctg
gatgctttcgctgaggagctggagagacagggttatggcaacaaaggaatcacactgtat
gacattcgtgcagagctcagctgtaggtataaagacctccgagccccatacagaccaccc
aacacagaggaagtctttaacatgcttaccaaagaaactccagagaccttctacattggt
aagctgataaccagtgttgtaacgggcatcgctcacagaaggccacagggggagagttat
gaccaagcaattcgtaatgatgagactggactgtggcaatgtcctttctgtcagcaggac
aacttccctgaactgagcgaggtttggaaccactttgacagcggctcctgtcctggccaa
gctattggtgtgcgatctcgtttggacaatggtgtcatgggtttcatccctaccaagttc
ctttcagacaaggtggttaagcaccctgaagagagggtaaaggttggcatgactgtgcat
tgtcgtatcatgaagatcgacattgagaaattcaacgtggatctcacctgtaggacatct
gacttggctgacaagaacaatgagtggaagcttcccaaggatacctactatgactttgat
gctgaagctgaggatgtcaaacacgatgaggaacagaagaagaaacagcagagaaccact
tatatcaagagagtcattgcccatccatcgttccacaacatcaacttcaaacaggctgag
aagatgatggaaacaatggatcagggtgatgtggtgatccggcctagtagtaagggagag
aaccatctgactgtcacctggaaggtagcagatggaatctaccagcacgtggacgtccgg
gaagagggaaaagagaatgctttcagtctggggcacacactgtggatcaacaatgaagag
tttgaggatttggatgaaatcacagcccgttatgtgcagcccatggcagcttttgctcgg
gatttgctcggccacaaatacttccaggaatgcaatggtggtgacaggaagaaaatggag
gagctcctaataaggaccaagaaagagaagccaacattcatcccctactttgtgtcagcc
tgcagagatctgccaggaaagttcctgctgggataccagcctagagggaagccaaggatc
gagtatgtcaccatcactccagatggtttcaggtaccgctcccagatattccccacagtc
aatggactcttccgctggtttaaggaccattaccaggagcctgtgccaggcgttacgcct
agcagcagtagcagaacacgaacaccggcgtctgtgaatgcaactccagccaatattaac
attgcagatttgactcgagcagtcaactctctgcccaggaacatgacgtcccagatgttt
aacgccattgcagcagtaacggggcagggccagaatcccaacactactccagcccagtgg
gcctccagccagtatggatatagtggaggcagcagtgcgggaggaggaggcagtagcagc
gcttatcacgtgtttgccacaccgcagcagcctatggccacgcctatgatgacgccaagc
tactcgtacaccaccccaggccagcagcaggctatgaccacaccacagtatactagcagc
acgccgcagtcctcccacggacaccaccagcacccttcttccacgccgtcctcatcctca
tccagggttcggacaccacagcctaaaacaagcacccacaccgctgtggattggggtaaa
atggctgagcagtggctgcaggagaaggaggcagagagacggagacagaagacccctcga
atgacgccccgcccatcacccagccccatgattgagagcacgcccatgtccattgctgga
gatgccacacccctgctggatgagatggaccgataa
DBGET
integrated database retrieval system
