Colossoma macropomum (tambaqui): 118820927
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Entry
118820927 CDS
T09004
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04136
Autophagy - other
cmao04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118820927 (wipi1)
04136 Autophagy - other
118820927 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118820927 (wipi1)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118820927 (wipi1)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118820927 (wipi1)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118820927 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_HPS5
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR19_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
118820927
NCBI-ProteinID:
XP_036445159
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MEGEDAAGGARRPGLGCASFNQDSTSLAVGTKTGYRLFSVTAVDRLECIHESAESPDVYI
VERLFSSSLVVVVSQAMPRRMNVYHFKKGTEICNYSYSNTILAVRLNRQRLIVCLEESVY
IHNIKDMKLLKTLLNTPPNPSGLCALSINHSNSYLAYPGSATIGEIIVYDANNLSTVTMI
PAHDSPLAAITFNASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSLSFSP
DAQFLCASSNTETVHIFKLEQHGPSGEEETPTWSAYVGKMFTAASSYLPAQVSGMMSQDR
AFATVRLHTACQKNVCTLATIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQTHRLFGS
NEDRDEAGVSEGSAAPQSYAATAATVPTSGPVSATLTGYSEDGGVSKGEVIPEHEFAAGP
VCLDDETEFPPINRCRDGSRRDKSRRP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagggggaagacgcggctggtggggctcgcaggcccgggttgggctgcgcctccttc
aaccaggactccacgtcgttggctgtgggcaccaaaactggatacaggctattctcggtg
accgcagtggaccgattagagtgcattcatgagagtgcagaaagtccggacgtgtacatc
gtggagcgtctgttctccagcagtctggtggtggtggtcagccaggccatgccgcgccgc
atgaacgtctaccactttaagaaaggcaccgaaatctgcaactacagctactccaacacc
atcctcgccgtgcgcctcaaccgacagaggctgattgtttgtctggaagaatccgtctac
atccacaatataaaagacatgaagctcctaaagactcttctaaacacacccccaaacccc
tcaggtctctgcgctctctctataaaccattccaactcttacctggcgtaccccggcagc
gccaccatcggagaaatcatcgtctacgacgccaacaatctgagcaccgtcaccatgatc
cccgctcacgacagcccactcgccgccatcacctttaacgcctcaggaaccaaactcgcc
agcgcctccgagaggggcactgtgattcgagtgttctccattccagaaggtctgcgcctg
ttcgagtttcgccgaggaatgaagaggtatgtgaacattagctctctgtccttcagccca
gacgctcagttcctctgcgcctccagcaacacggagaccgtgcacattttcaaattagag
cagcacggtccgagtggcgaggaggagaccccgacttggtcagcgtacgtggggaagatg
tttacagcggccagcagctacctcccagcgcaggtttctggaatgatgagtcaggaccga
gcgttcgccaccgtccgtctgcacacggcctgccagaaaaatgtctgcacacttgcaaca
atccagaagcttccacggctgcttgtggcctcatccgacgggcagctctttatctacaac
attgaccctcaggatgggggtgaatgcacactggtacagacgcacaggttgtttggctca
aatgaggaccgagatgaagctggtgtctctgaaggttcggctgctccacagtcctacgct
gccactgccgccaccgtccccacatctggacctgtatctgccactctaacaggttactca
gaggacggcggggtcagtaagggggaggtgattcccgagcacgagtttgcagctggacct
gtgtgtctggacgacgagacggagtttcctccaataaatcggtgtcgtgacggatctcgg
cgggacaaaagcagacgtccgtga
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integrated database retrieval system
