Colossoma macropomum (tambaqui): 118820994
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Entry
118820994 CDS
T09004
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118820994
03015 mRNA surveillance pathway
118820994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118820994
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118820994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118820994
NCBI-ProteinID:
XP_036445272
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MAPSPTKRRERSEDKARERGKEKAGAKEGTEKERGRDKNRKRRSNSTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSPSRRRHDNRRRSRSKS
KSQKRGDDKERKRRSPSPKPTKLHVGRLTRNVTKDHIQEIFSTYGKIKMIDMPSDRFHPN
LSRGYAYVEYETPEEAQKALKHMDGGQIDGQEITATAVLTPRVRPAPRRLSPPRRMPPPP
PMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSAGRRRHRSRSSSNSSR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtcacctactaaacgcagggagcgttcggaagataaagctagagagaggggc
aaagaaaaggctggggcaaaggaaggtactgagaaggagaggggaagggacaagaatcgt
aaacgccgcagtaactctactgggagcagcagcagcagatcaagatccagttccagctca
agcagcagctctggttccagctcgggttcctccagcggctccagctcctcttcaggctct
agccggtctgggtcctccagctcttctcgctcctccagctcctctggctcctcagggtca
cccagccccagccccagccgccggcggcacgacaatcgcagacgctcacgttcaaagtcc
aaatcgcagaaaaggggtgacgacaaagaacggaagaggaggagccctagccctaaacct
accaaacttcatgtaggaagactgactaggaatgtcactaaggatcacattcaagagata
ttctctacgtatggcaagatcaaaatgattgacatgccgtcagaccgttttcatccaaac
ttatcgaggggctatgcctacgttgagtatgagactccagaggaggcgcagaaggcccta
aaacacatggatggaggtcagatagacggtcaggaaatcacagcaacagctgtcctgact
ccaagggtacggcctgccccccgcagactgtctcctccacgcaggatgccccctcctccc
ccaatgtggcgtcgtactccacctcgcatgaggagaaggtctcggtcaccgcggcgccgc
tccccagtgcggaggcgctctcgttccaggtctgcgggccgcagacgccatcgctcacgc
tccagctccaactcctcacgataa
DBGET
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