KEGG   Colossoma macropomum (tambaqui): 118821098
Entry
118821098         CDS       T09004                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118821098 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118821098 (wdr48a)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     118821098 (wdr48a)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_HPS5 WDR54 RAWUL Beta-prop_NUP159_NUP214 Nucleoporin_N WD40_like Beta-prop_RIG_1st Tfb2_C
Other DBs
NCBI-GeneID: 118821098
NCBI-ProteinID: XP_036445427
LinkDB
Position
Unknown
AA seq 674 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT
VIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQ
QRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKME
LDRSADPPSAIWVSTTKSTVNKWSLKGIHNFRTSGDYDNDCSTPLTPLCTQPDQVIKGGA
SIIQCHILNDKRHILTKDTNNNIAYWDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWFS
VDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHSSP
MDEETELNHVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLL
NETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYE
KIINLDSESQTGGSAGEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWK
SGGDLTLHYRQKST
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcgacccatcacaggcagaacgcagctgggcggagaaaagtgcaggtctcgtatgtg
atcagggatgaagtggagaagtacaatcgtaatggagttaatgcgctgcagctggaccca
gcccttaaccggctcttcacggctggtcgagattccattatcaggatatggagtgtcaac
cagcacaaggacccatacatagcatcaatggaacatcacacagactgggtcaatgacatt
gtcctctgctgcaatggaaaaacattgatatctgcttcatcagacaccacggtgaaagtc
tggaatgcacacaagggattttgtatgtcgacattgcgaacacacaaggattatgttaaa
gccttagcatatgctaaagacaaagagttggtggcctcagcgggtctggacagacagatc
ttcttgtgggatgtgaacaccctgacggcgctgactgcctccaataacactgtcactaca
tcctctcttagtgggaacaaagattcaatctacagtctggctatgaatcagatgggcaca
gtaatagtatctggatccactgagaaggtgttaagagtgtgggacccacgtacctgtgcc
aaacttatgaagctgaaaggacacacagacaatgtcaaatcattgctactcaacagagat
ggtacccagtgtctgtcaggcagttcagatgggactattcggctgtggtcactcggccag
cagaggtgcatagccacataccgtgtccacgatgaaggtgtctgggctctacaagttaat
gaagccttcacgcatgtctattctggaggccgggaccgcaaaatttactgcacagacctg
cgcaatccagacatacgtgttcttatttgtgaagagaaggcccccgtcctcaagatggag
ctggacaggtcagcggacccaccgtcagccatctgggtgtccaccacaaagtccaccgtt
aacaaatggtctctaaagggcatccataatttccgaacatctggtgactatgacaacgac
tgcagcactcctctgacaccactgtgcacacaaccagaccaagtcattaaaggtggggcc
agtataattcagtgccacattctcaatgacaagagacacatactcaccaaagacactaac
aacaatatagcatactgggatgtgctcaaggcttgtaaagtagaagatttgggcaagatg
gagtttgatgaggaaatcaagaaacggtttaagatggtttacgtgcctaactggttctca
gtggatcttaaaacagggatgctgactattactctggatgagagtgactgctttgctgct
tgggtctcagccaaggatgctggattcaccagtcctgatggatcagacccaaagctgaat
cttggtggtcttctgctacaagccttgctggagtattggcccaggacacacagcagccct
atggatgaggaaacggaactgaaccatgtgaatggggagcatgagagcaggatacagaaa
ggaaatggttatttccaagtgccaccccacactcctgtcatatttggtgaagcaggtggg
aggacactgttcaggttattgtgtcgagactctggaggcgagactgagtctatgctactc
aatgagactgttccgcagtgggtgattgacatcacagtggacaaaaacatgcccaaattc
aacaaaattccgttctacctccagcctcactcttcatctggtgccaagacattaaagaag
gaccgtctgtcagcaagtgacatgctccaggtgaggaaggtgatggaacacgtttatgag
aaaatcattaatctggacagcgagtcccagacgggtggctcagccggagagaaaccgagc
gagcagaaggaggaggaggacatggctgtactagcagaggaaaagattgagctgctctgt
caagaccaggttctggaccccaacatggacctacgaacagtaaagcatttcatttggaag
agcggtggtgatctaacacttcactacaggcagaagtccacgtga

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