Colossoma macropomum (tambaqui): 118821331
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Entry
118821331 CDS
T09004
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118821331
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118821331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118821331
NCBI-ProteinID:
XP_036445785
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MTEEREKSAADPPCSPAGTSSSMSPDESDSDAPSSPAGSLHSGAGKKLDEDDDRFPACIR
DAVSQVLKGYDWSLVPMPVRGNGALKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
LSKTLGKLWRLLSESEKRPFVDEAERLRVQHKKDHPDYKYQPRRRKSVKPGQSDSDSGAE
LSHQMYKAEPGMGGLVGLADHHHSDHPGQPHGPPTPPTTPKTDLHHGAKQDLKHEGRRLL
EAGRQNIDFSNVDISELSTDVISNIETFDVHEFDQYLPVNGHSGAGVSSMASESGHGPNP
NSYTTSYAHPGANGAGWCRKGALASASSPSPGASDVGQHRPHIKTEQLSPSHYSEHSHGS
PSHPDYSSYSAQSCATSAATSFPSSQCDYTDLQSPNYYSPYSSYPSSLYQYPYFHSSRRP
YGGPILNSLSIPPSHSPTTNWDQPVYTTLSRP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcgcgagaagtccgcggcagacccgccgtgcagcccggcgggcacttcc
agctccatgtctccggacgagtctgactcggacgcgccctcctctcctgccggctcgctc
cactcaggcgcgggcaagaaactggacgaggatgacgacaggttcccggcgtgcatcagg
gacgccgtgtcgcaggtgcttaaaggctacgactggtcactcgtgcccatgcccgtgcgc
ggcaacggcgcgctcaagagcaagccgcacgtgaagaggcccatgaacgcgtttatggtt
tgggcgcaggcggcgcggaggaaactcgcggaccagtatccccatctgcacaacgcagag
ctcagcaaaactctgggcaaactgtggcgcctgttgtcagagagtgaaaagcggcccttt
gtagacgaggcagagagactgagggtccaacacaagaaagaccaccccgactacaagtac
cagccaaggcgtcggaaaagcgtgaagccggggcagagcgactctgactctggggccgag
ctgagccatcagatgtacaaagctgagcctgggatgggtggcctagtgggcttagctgat
catcatcattcagaccatccaggccagccccatggaccaccaacaccaccaacgacaccc
aaaactgacctccatcatggggcgaagcaagacctgaagcacgaaggcaggcggcttctg
gaagccgggcgccagaacattgacttcagcaatgtggacatctctgagcttagcacggat
gtcatcagcaacatagaaaccttcgatgtccacgagttcgaccagtacctccctgtcaat
gggcactctggagcgggggtgtcctccatggcctcagagtctggtcacggacccaacccc
aatagctacaccacgtcctacgcccaccctggggccaacggggccggctggtgccgcaaa
ggggccttggcctcggcctcctcaccgtcccctggcgctagcgatgtgggtcagcacaga
cctcacatcaaaacagaacagctgagtcccagtcactacagcgagcactctcacggctcg
ccctcccaccccgactacagctcctacagcgctcagagctgcgccacctcggctgccact
tccttccccagctcccagtgtgactatacagacctccaaagccccaactattacagccct
tactccagctacccctccagcctctaccagtacccctacttccactcttcacggagaccc
tatgggggccccatcctcaacagcttgtccattccaccctcccacagccccacgacgaac
tgggaccagccggtttacaccaccttatcaaggccgtga
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