Colossoma macropomum (tambaqui): 118821352
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Entry
118821352 CDS
T09004
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118821352 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmao04054
]
118821352 (dhx58)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118821352 (dhx58)
Pattern recognition receptors [BR:
cmao04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118821352 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
Rpr2
fvmX5
Motif
Other DBs
NCBI-GeneID:
118821352
NCBI-ProteinID:
XP_036445818
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MEISLRSYQKEVVEVALRGQNSIIWLPTGGGKTRAAVYVAKRHLETHPDAKVAVLVNKVH
LVDQHYQKEFRPHLGHTVKIVAISGDSQEKDFFGRVVRDSDLVICTAQILENAIINTEED
KHVELTDFTLLIIDECHHTHKDAVYNKIMARYVKGKMEGARNLPQILGLTASPGTGGAKT
QEGAVNHVLQICANLDSVIVSTKNYVPELRVVVPRPIKKYDIVDTRLFDPFGDHLKEMMR
MIHGYMASDVTFREMGTQEYENDVVELEKKGVREENRLLAQCALHLRKYNDALLINDTVR
MVDALRLLQDFYRTKSENRMDATDIFLSGLFEENQVELRLLASDARNENPKLVQLQRTLL
EQFQDRNSRGILFSKTREGTRCLYDWVRANPALQRADIRAAILTGAGNGANHMTQSGQRE
TICRFRVGDLNLLISTSVAEEGLDIPECNVVVRYGLLTNEIAQQQASGRARAQDSVYSVV
AQAGGREMRREKTNEYLEELTERAVAEVQRMSPEEFRRKVNALQRADVMERILTCRRREE
KKKRYNPSQVQFVCRSCFTPVAHGDDMRVVNNSQHVNINPDFKNYYQVGGQVHIDRMFED
WEPGRVISCAACGLEWGFEVKLRKVVVLPCLKIKSFSMKTPQGNRTAKQWKEVEFAVEEF
EFTEYVSSRFLDLDLE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagatttcactgaggtcgtaccagaaggaggtggttgaggtggctctgagggggcag
aacagtatcatttggctgcccaccggaggaggaaagactcgagctgcagtgtacgtagcc
aaaaggcacttggagacgcatcccgatgccaaagtggctgttctcgtcaacaaggtgcac
ctggtcgatcagcactatcagaaggaattccggccccacctgggtcatactgtaaagatc
gtggccatcagtggagacagccaggagaaggacttttttggccgtgtggtcagggactca
gacctggtcatctgcaccgctcagattctggagaacgccataataaacacagaggaggac
aagcatgtggagctcacagacttcacactgctaatcatagacgagtgccaccacactcat
aaggatgcagtgtataataagatcatggcgcgttatgtgaaggggaagatggagggagcg
aggaatctgcctcagattctgggcctcactgcctcaccaggcaccggcggagccaagaca
caggagggagccgtcaaccatgtgctacagatctgtgcgaatctggactctgttattgta
tccacaaaaaactatgtgccagagcttagagtggttgttcccagacccataaagaagtac
gacattgtggatacccggcttttcgacccatttggggaccatctgaaggagatgatgagg
atgatccatgggtacatggcgtcagacgtcacttttcgcgagatgggcactcaggagtat
gaaaatgatgtggtggaactggagaagaaaggtgttcgggaggagaacaggctgttggct
cagtgtgccttacacctgagaaaatacaatgacgcccttctcatcaacgacaccgtgcgc
atggtggacgccctgcggcttctgcaggacttctaccgcacaaagagcgaaaacagaatg
gacgcaactgacattttcctctctggactctttgaagagaaccaagtagagctgaggctg
ttggcttcagatgctcgaaacgagaaccccaagctggtccagctgcagcgcaccctgctg
gaacagtttcaggacagaaactcgcgtggcatcctcttctccaaaaccagagagggcaca
cgctgcctgtacgactgggtacgtgccaacccagcactgcagcgtgccgacatccgcgct
gccatcctcactggagctggcaatggtgccaatcacatgacacagagcggtcaaagagaa
actatttgtagattcagagtcggagacctcaacctcctcatctccaccagtgtggctgaa
gaaggccttgacattccagaatgtaacgtggtggtgcgttatgggctgctgaccaatgag
atcgctcagcagcaggccagcgggcgggcccgggcccaggacagtgtgtattcagtggtg
gcgcaggcaggtgggcgggagatgcgaagggaaaagaccaacgagtacctggaggagctg
accgaaagagcggtcgcggaagtacaacgcatgtcccctgaagagttccgcaggaaggtg
aacgcgctgcagagggctgacgtgatggagaggattctaacctgcaggcggagagaggag
aagaaaaagcggtacaatccatcccaggtgcagttcgtctgcagaagctgcttcactcct
gtcgcccatggagacgacatgagagtcgtaaacaactcacaacacgtgaacatcaaccct
gacttcaaaaattactatcaggtaggagggcaggttcatatagaccggatgtttgaagac
tgggagcctggtcgtgtcatcagctgtgctgcctgtggactggagtgggggttcgaggtc
aaattaagaaaggtggtggtactgccctgcctaaaaataaaaagtttttcaatgaagact
cctcagggcaaccgcacagccaagcagtggaaggaggtggagtttgctgtggaagagttt
gagtttactgagtacgtgtccagccgcttccttgacctggacctagagtga
DBGET
integrated database retrieval system
