Colossoma macropomum (tambaqui): 118821432
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Entry
118821432 CDS
T09004
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmao01001
]
118821432 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmao04054
]
118821432 (ciita)
Enzymes [BR:
cmao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118821432 (ciita)
Protein kinases [BR:
cmao01001
]
Serine/threonine kinases: Other
TAF1 family
118821432 (ciita)
Pattern recognition receptors [BR:
cmao04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118821432 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
nSTAND_NTPase5
AAA_25
AAA_22
AAA_16
NB-ARC
AAA
FtsK_SpoIIIE
AAA_30
VapE-like_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
118821432
NCBI-ProteinID:
XP_036445924
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MVPFQEVLFEVRKVLQDAHPDLLPAFLTQLLEAQVFSAQYFQSLFQCVDPDLGDVTDVED
LARRLALPIWQKWDVSKEILFSALGDTEESQPDICAGNDDPIALDPQLLELIPDSLLQDL
ITSDFLHELDLDALCAELKEDYDHGEAAECPAPASTESEKEERPTRKRAAGERAPRKAPR
LKRRKTVQPSTESPHPQDKSHVIDVSPPPLPQLVHVPLTIATALNSASLLPSSGTPALQF
IQTINHLSPTVINSIVPVGPTYVLVSPQSVRPVHQLVPLSPADGAVAPAELSRTIIPMSS
LSDSTSRSQPPSPLTPVSPTKDKTTQEDSPPTTPQSPVIPERVEDFIQQLKSHLRKTCSL
MPGGLRMDSHYIDTQLVQRKLVIRTGKNANKCLEKELVVLIDSERKKATVDRSHVFQNCG
PKPKCLITVLGKAGTGKSTLIQRLALDWATGSLPQFQFVFLLNCKVLNLTSPNYSLKTLL
FGLSTTPGCEDSEAVFKHVLSNPDKVLLVFDSFDDIGDLEGLLQSFATSVTDNGYSVRQL
FSGLFQKKILSGCTLLIATRPKDVLNQLLRKVDSILELCCFSPKDIESYTSSYFADASKQ
ESTLRKIQSQKYIFSLCSNPLLCRFTCFLMEHQDTDGYALPSTLTDLCQRVLDQHLELTA
KEQGSKQDITELCNMAWEGFKTYSSLLSQDQEISKELLDCGINCEILTSHTVCEESGKSQ
VTYFANLFMQNLLGALFLVQSKDVNDRTLVAQTVLHHRKRKVHGEWQDVLQRFVIGSLYQ
KATPHCCGILQSSVDAQAKRKAVEAHLKNLNPGELIPSRLLELFHCVYEASNVKLAKLLV
KNLPDILSFCGAHLTMTDVYVVWHLLQHAKGLKRTFSIDMQDTCIPLSGLKELVALDCVT
SFRAPTMDTIDLWEDLHRSSDELSLKNAIEKFTIDPFKASQLGHIENLVLLVQIHREKKL
PMSNAEAALEDGIPAVRHLHKLEYELGQQNGPGAFHKLAGILPALQSLQHLDLENNKIGD
REAEKLASVLHSLSSLKMLNLSQNCIGDAGVEKLAQALSAASSLQSLSLYGNLIADSGAE
NLASVLPAMKSLLDLDVKYNKFTDVGAKKLSAALKSSPSMKSLQMWNNCIPLGVFDHLRL
QDPRIRAL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccttccaggaggtcctgtttgaggtccggaaagttctgcaggatgcccaccct
gacctcctgcccgctttcctcacccagcttctggaggcccaagtgttttcagctcagtac
ttccagtctctcttccagtgtgtggaccctgacctgggtgacgtgacagatgtggaagac
ttagccaggagacttgctcttcccatttggcagaaatgggacgttagcaaggaaatcctc
ttctctgcactcggggatacagaagaatcccagccagacatttgtgctggaaatgatgac
ccgattgcccttgatccacaactcctggagctgataccagactcgctgctccaggatctg
atcacctctgatttcctgcatgaattagatttagatgctttgtgtgctgagctgaaagag
gactatgaccacggtgaagcagctgagtgtcctgcaccggcgagtacagagagtgaaaag
gaggaaaggcctacgaggaagcgagcagcgggagaaagagccccgaggaaagcgccacgc
ctcaaacgcagaaaaacagtccaacccagcaccgaaagtccccatccgcaggacaaatcc
catgtgattgatgtgagcccgcccccgctgccccagcttgtgcatgttcccctcaccatc
gccactgcgctcaacagcgcctctctgctgccctctagtggtacaccagcgctgcagttc
atacagaccattaatcatctctctcctactgtgattaacagtatagtcccagtcgggccc
acatacgtcctggtctcgccgcagtctgtacgtccagtgcatcaactcgttcctctttca
ccagctgatggtgcagtggcccctgcagagctcagtaggaccatcatccccatgagctcc
ttatcggacagcacgagcaggagtcagcccccgtcacccctcacccccgtctcacccaca
aaagacaaaacaacgcaggaggactctccccccacaacccctcagagtccagtcatacca
gaacgagttgaggacttcattcagcagctgaaatcccatctaagaaaaacttgtagcctg
atgccaggaggcctgaggatggactctcactacattgacactcagctggtgcagaggaag
ctcgtaatccggactggcaagaatgcgaacaagtgcctggagaaagagcttgtggtgctc
attgactctgagcgaaagaaagccacagtggacaggagccacgtcttccagaactgtgga
cccaaacccaaatgtttgatcaccgtcctcggaaaggccgggacggggaagagcacgtta
atccaacgcttggctttggactgggccactggcagccttccgcagttccagtttgttttt
ttgctgaactgcaaggttttgaacttgacaagtccgaattacagcttaaagactttgctg
ttcggtctgtccaccacccccggctgtgaagattcggaagctgttttcaaacatgtgctg
tccaatccagataaggttctcctggtatttgacagcttcgatgacatcggagacctcgaa
ggtctccttcagtcctttgctacctcggtcacggacaatggctacagcgtaaggcagctg
ttttctggccttttccagaaaaagattctgtcagggtgcactctcttgatagccaccagg
cccaaagatgttctgaaccagctgctgcgcaaagtggacagcattctggagctctgctgc
ttctcgcccaaggacatagaatcatacacctcaagctatttcgcagatgcctcaaagcag
gagagcacgctgaggaagatccagagccaaaagtacatcttcagcttgtgctccaaccct
ttactgtgtcggtttacgtgcttcctcatggagcaccaagacaccgacggttacgcattg
ccatcgactctaacggatttgtgccaaagagtcctcgaccagcatctagagctgacagct
aaagagcagggatccaaacaggacatcacggaactgtgtaacatggcatgggagggtttc
aagacttacagctcccttttaagccaagatcaagagatctccaaggagttgttggactgt
gggattaattgtgagatcctcacatcccatacggtatgtgaggagtctggcaagagccag
gtcacttactttgccaatcttttcatgcagaacctccttggcgctctgtttttggttcaa
tccaaagatgtgaacgacaggacgttagtggcccagacagtgctccaccaccggaagagg
aaagtgcatggagaatggcaggatgtcctgcagaggtttgttattgggtcgctttaccag
aaagcaacacctcactgctgtggtattctgcaaagctccgtggacgcccaggccaaaagg
aaagccgtagaggcccacctgaaaaacctcaatccaggcgagttgattcccagcaggttg
ctggaactcttccactgtgtctatgaggccagtaacgtcaagctcgccaaactcctggtc
aagaaccttcctgacatcctgtcgttttgtggggctcatctcacaatgacggatgtctat
gttgtctggcacctccttcagcacgccaaggggctcaaacggacgttttccattgacatg
caggacacgtgtattcctctcagtggtctcaaggagctggtggcgttggactgcgtcacg
tcattccgggcacctacaatggataccattgacctgtgggaggacttgcatcgcagcagt
gatgagctgagcttgaaaaatgccattgaaaaattcaccatagacccatttaaggcctca
caattgggtcacatagagaacctggtcctccttgtccagatccacagagaaaagaagctg
ccgatgagcaatgctgaagctgctctggaggatggaatccctgcagtgaggcatcttcac
aaactggaatatgagctcggccagcagaacggacccggggcttttcacaaactcgctggg
atcttacctgctctccagtctcttcagcacctagatctggagaataataaaatcggagac
cgtgaagctgaaaagctggcgagtgtccttcactctctgtcatctctgaagatgctgaat
ctgtctcagaactgtatcggagacgctggagtggagaaactggcccaggccctgtcagcg
gcctcctctctacagagtctcagcctctacgggaatttgatcgcggacagcggagctgaa
aacttggcctccgttttaccagccatgaagtctctgctggatctggatgtcaagtacaac
aagttcacagatgttggcgctaagaagctcagcgcggccttaaaaagctccccgagcatg
aagtcccttcaaatgtggaacaactgcatccctcttggggttttcgatcatcttcggctt
caggaccccaggatcagagccctgtaa
DBGET
integrated database retrieval system
