Colossoma macropomum (tambaqui): 118821472
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Entry
118821472 CDS
T09004
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118821472 (tsen54)
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
118821472 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
118821472
NCBI-ProteinID:
XP_036445997
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MAASDTLTEAVQVEFSNELLSPSELLHARSRNHKIPVKGQKDFLPTGSEQQRGRLQKSLD
EHWTLVAEERVERLGNLVNAEWIPEEKLVKLQSPAGKFWQTMGFSDRGKQCLLPEEALYL
MECGSVQVFYQDLPLSIQEGYEQFLSPETVTLHQYQVFGHLKRLGYVVNRFDPSIVPSLY
ERQLNLPLSCNKQTKHLKRKRSNSPLSSSHCDKQSTVPVEETTAAQQCEGEVMTGDPCLD
QTASDQAKTEQTPQDELMEFNTVLDRAPGRNWWTDTSCQAQHTSGQHTSARPWDFRCILF
PDLGSSRAGHARLAAPDPKLLPGALQVGECEVAPWLRKLNLKAERLSRRERERQRERDRY
HRDINDDREVRHCRNWAEYLELMEKRRSQRCRERPAHLWEQDVIPLTQPGQCDSHRDLLE
QVSIIQSSDLLHGASRLPHSEQWSICFNVYQPDMVADFKKSHPGKPYTRICVCSFDGPVP
DLRVMKQLSFQSGDVPVTFAVVDHGDISFYCFKEFKLPTDIY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtgacactcttacagaggctgtacaagtagaatttagtaatgaattacta
agtccatcagagctgctccatgcgcggtctcgaaatcataagattcctgtgaagggccag
aaagacttcttgcccaccggatctgagcagcagagggggcgcctgcagaagagtctggat
gagcactggacactcgtggcggaggaacgagtagagagacttggaaaccttgtaaatgca
gaatggattccagaagaaaagctagtgaagctgcagtcaccagcagggaaattttggcag
actatgggcttttcagatcgcggcaagcagtgcttgcttccagaggaggctctctacctc
atggaatgtggcagtgttcaggtgttctaccaggaccttccactatccatccaggaaggt
tatgaacagtttctttctcctgaaacagtgactctccatcagtaccaagtgtttggtcat
ttaaagagactgggatatgtggtgaacagatttgatcctagcatagtgccgtccctctat
gaaagacagctgaatctgcctctgtcctgcaataaacagactaaacatctgaagaggaaa
cgtagcaacagccccctaagctctagccactgtgacaaacaaagtactgtgcctgttgag
gagacaacagctgcacaacaatgtgaaggagaagttatgaccggtgatccatgcctagac
cagacagcctctgaccaggcgaaaacagagcagactccccaggatgagctgatggagttt
aacacagttttggacagagctccagggagaaactggtggacagatacatcgtgccaggcc
caacatacttcaggccaacatacgtcagctcggccatgggacttcagatgcatccttttc
cctgacctgggctcgtccagggctggccatgcccgcctggcagcccctgaccctaagcta
ctcccaggggctctgcaggtgggagaatgtgaggtggccccctggctgaggaaactgaat
ttgaaagcagagaggctctcccggcgggagcgggagcgacagagggaacgggacagatac
catcgggacattaacgatgacagagaggtgcggcactgcaggaactgggccgaatattta
gagctgatggagaagaggaggagccagcggtgcagggaaagacctgcccacctctgggaa
caggacgttatacccctcactcagcctgggcagtgcgattcacaccgtgatctgctggag
caagtcagcatcattcagtcttctgatttgctgcacggagcctccaggttacctcactca
gagcagtggagtatttgtttcaatgtttaccagcctgacatggtagctgactttaagaag
agtcaccctggaaagccctatacacgcatttgtgtttgcagttttgatggtccagtgcct
gacctgcgtgtcatgaagcagttgtccttccagagtggggacgtcccagtcacatttgca
gtggtggaccatggagatatctctttctattgcttcaaggagttcaagctgcccactgat
atctactaa
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