KEGG   Colossoma macropomum (tambaqui): 118821622
Entry
118821622         CDS       T09004                                 
Symbol
tnpo2
Name
(RefSeq) transportin-2 isoform X1
  KO
K18727  transportin-2
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118821622 (tnpo2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmao03019]
    118821622 (tnpo2)
Messenger RNA biogenesis [BR:cmao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     118821622 (tnpo2)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_GCN1 HEAT_2 TOR1L1_N IBN_N HEAT_EF3_N Arm TPR_IMB1 Vac14_Fab1_bd TPR_IPO5 HEAT_MROH2B_C Cnd1 TPR_DNAAF5 PDS5 MMS19_C Adaptin_N Ltn1_1st Dopey_N UNC45-central HEAT_MROH2B_1st INTS7_N TPR_TTI1_C RTP1_C1 DUF2573 DUF1475
Other DBs
NCBI-GeneID: 118821622
NCBI-ProteinID: XP_036446214
LinkDB
Position
Unknown
AA seq 902 aa
MEWQPDEQGLQQVLQLLKDSQSPNTATQRAVQQKLEQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQNFPPAVADFIKQECLSNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIVQYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDIDE
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKDLLFHPDWVIKESGILVL
GAIAEGCVQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDAYLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLGFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQ
LVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAEFMPILGLNLNPEF
ISVCNNATWAIGEISIQMGSSDSRQGAGDCSGVEMEPYVGLVLNHLVEIINRPNTPKTLL
ENTAITIGRLGYVCPQEVAPMLPQFIRPWCQSLRNIRDNEEKDSAFRGICLMIGVNPGGV
VQDFIFFCDAVASWMNPKEDLRDMFYKILHGFKDQVGEENWQQFSEQFPPQLKERLSACY
GV
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggagtggcagccggatgaacagggactccagcaggtccttcagctcctgaaagactct
cagtccccaaacacagccacgcagagagctgtgcagcaaaaactggagcagctgaaccag
tttcctgacttcaacaactatctcatcttcgtcttgacaagactgaaatctgaggatgag
ccaacacgttcactcagtggcttgattctaaagaacaatgtgaaggcccactaccagaac
ttccctcctgcagtggcagacttcatcaagcaagaatgtctgagcaacattggggaccca
tcccccctcattcgcgctaccatcggtatcctgatcacaaccatcgcttctaaaggggag
ctgcagacatggcctgagctgctccctcagctctgcaacttgctcaactctgaggattat
aacacctgtgagggttcatttggagctctacagaagatctgtgaggattcctcagaactg
ttggacagtgatgccctgaaccgacctctaaacatcatgatccccaagttcctccagttc
ttcaagcactgtagtcccaagataagatctcatgccattgcttgtgtgaaccagtttatc
attggaagagctcaagctttaatggacaacattgacacctttattgagagtctgtttgcg
ctggctgcagatgaggactccgaggtgaggaagaatgtatgtcgggcgctggtcatgctg
cttgaagtccgtatcgatcggctcatcccacacatgcacagcatcgttcagtacatgcta
cagcgtacacaggaccctgatgagaacgtggctctggaggcctgtgagttttggctcacc
ctggctgagcagcccatctgtaaggaggtgctatctggacacctggttcaactgattcct
attctggtgaatggaatgaagtactctgaaatcgacatcatcttgctgaagggtgacgtg
gaggaggatgaggctattccagacagcgagcaggacattaaaccccgcttccacaagtcc
cgcacagtcacactgcagcacgaagggggcgagggagaggagggggaggatattgacgaa
gatgatgacgatgacgacgatactctttctgactggaacttgcgtaaatgttcagcagca
gcgctggacgtgttggctaatgttttccgggacgagttgctcccccatctgctcccactg
ttgaaggatctgctgttccacccagactgggtcatcaaggagtctggcattctggtgctg
ggggccatcgctgagggttgtgtacagggcatggttccatacctgcctgagttgattcct
cacctgatccagtgtctgtgtgataagaaagctctggttcgctccatcgcctgctggacg
ctgagccgctacgctcactgggtggtcagccagccacccgacgcctacctcaaacccctc
atgaccgagctgctcaaacgcatccttgatggcaacaagagggtgcaggaggctgcctgc
agtgcatttgcaactctagaggaagaggcctgtactgagctggttccctatctgggcttt
attctggacacacttgtctttgcttttggaaaataccagcacaaaaatcttctcatcttg
tatgatgccattggaacattggctgactctgtgggccaccatctcaatcagcctgaatat
atccaaaagctgatgccccctctcatccagaaatggaatgagttgaaagatgaagacaag
gatctgttccctctgttggagtgtctgtcctcggtggccactgctctgcagagtggcttt
ctgccctactgtgagccagtataccagcgctgtgtcaccctggttcagaaaacccttgct
caggcaatgatgtataatcagcacccagagcagtacgaggctcctgataaggacttcatg
atcgtggctctggacctgctcagtggactggctgagggtttgggtggccatgtggagcag
ctggttgctcgcagcaacatcatgactctgcttttccagtgcatgcaggacaccatgcca
gaagtgaggcagagctctttcgcgctgctgggggacctgaccaaagcctgcttccttcat
gttaagccctgcatcgctgagttcatgcccatcctgggactcaacctgaacccagagttc
atctcggtctgtaacaacgccacctgggccatcggtgaaatctccatacagatgggctca
agtgacagcaggcagggagcaggtgactgttcaggtgtagagatggagccatatgtgggg
ctggttcttaaccacctggtggagattataaacagacccaatacccccaagactctattg
gagaacacagccattacgattggtcgactgggatatgtttgtcctcaggaggtggcaccc
atgctgccacagtttattcgaccttggtgccagtcgctgagaaacatcagggacaatgag
gagaaagattcagccttcagaggcatctgtttaatgattggggtgaatcctggaggtgta
gtgcaggactttattttcttttgtgatgctgtggcctcatggatgaacccgaaagaagat
ttgagggatatgttctacaagatcctgcatggctttaaggaccaggttggggaggagaac
tggcagcagttctctgagcagttccccccacagctgaaggagcggctgtcagcctgctat
ggcgtttag

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