Colossoma macropomum (tambaqui): 118821657
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Entry
118821657 CDS
T09004
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118821657
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118821657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
118821657
NCBI-ProteinID:
XP_036446264
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MQSFRERSGFHGNQHCYQQEPHELSRLESYRHHHGQTRQGYEVNTLAAAGMPTAGAASKD
CYGQQTYPSYSSSSAQTKKPYRGGKAPSQHLQSGYSSHMSSGYSAQYMSEGHLQKWDEST
QMSQYEQDMVGRLEPGVSGSSQYLEQNILAISQSQCHLPSQPSTPVYTSPHQQGHTPNPT
PSPLMYPQSHLHFSQHSQPPSSTSSSYMEKCNPIPHSYKSGYGMPPNAQYSRQLGNHSSL
KQSGYRPQNSYGYQQPPSRAGFEQQASLQGMSGTPENLQKFQHYNQPQQNYCLTDISVRS
PEQYYQNCSPSSSHSPARSVGRSPSYSSTPSPLMPNPDTFQYGQQINPTASSSSAGLQDQ
AMLMPPHTHPSPSVNHQSQSYSGSMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLL
LSEALMASKKGGKRNQPKKGEDYRGQLRPIEDSSCPESQHGAPHTDAFGNPRSMPGEIQE
GGYSSSTEDQMDRSYYYFGQNKGPTQASAHSQLSLDTVSTCSMNSTDDMSIRSGDSVRSL
QTFEDNLNCDPRVQRVPFGEEHNSSLRSIRDERSPISVTAPSPMKQESNSPLDLKQAEST
LKENFEESAWSERMAEEKEFGKKNLSTELKCKGEVMEASEKQQEWLEDEKCPSLFHKINK
AVSDESYSYETDDTIYQELKNKYEAEEGDFAEKDHSDTSHKGTEDSEMKSEIFKTEPQPN
VEGSVSTSPAISRDILESDQYLPEKEENSDTPHLTSQTESSEERLSVSEGQNDSFEQQSV
SSHLATEVREEKESLTPTEEVVNNKAKPEESSAEACNKPEETAGRPLISTETAETTAQDT
THRSSERRSAACDIAPQSHSVKTGFSALNEKTTPQTQARDHIDRSDAKVLEPDSPQLPGK
SILHSAPSWADTPPSPQKGDEDIEPGISCPSAVTPSAKPEPVAPSAHPRLLGRKHARGRR
RLIHSNAGIRRQPSVEGDGAPPSPQKPSMPSSNSALFPDQMGAAQLDISSQTPKLLADGL
PSRMCTRSFGTQNTPKVCSPERKKPGPKHSSKPGPKPGPKLGPKPVPKPVLKPGPKAGLK
PGLKSGPKPSPKQSSKPVPKPGLKPGPKPCSKSGPKPGPKPGAVPTVKPGPKPGPKPPAI
PALKTGPKPGSKPTDGVIPKGPGRPRGLSSKIKTIKHEENVQAITEHIKDTSYISEKSEQ
QESPANTLDTVVGTTLGSSADNTMGSALEAPIENTSLKSVAKDQKSMVLRSRKQTQVKLT
EDKEKEKETLTETSAVKLTETQIQEVTASQPFVSQTSNLKSPSQEEVCMDSLTQPNEEVV
SVSVKRKSSLQSSEPVKKKKGVKASKKTKTQEPPLKTTVVGAKGSRGQRKRGHKLESDCS
ILIKDNTPPEDIGDTPCVPPQCPTKTKYLPPRKGRGLKYEAMVQKITSPASKKQPLTIQP
DVVPEESASKPAPEVTEKRETVNTPEVAPEEGENTVSIEETPDTACIPTPKKKRRKWAAV
ECTDTPDVALETGSLIINTPRLAKQRAIKNNHEMHLKQRKKRRKDAELANSVPVMEQVEQ
NKPDVPISPPALSPSPPSPSPPPPPPSSVSPDTDEKTQKEQSPMEICSIIIKPKRGRRPS
LKKQQEEALGQSPVKEEGQKVKKKPGPKKKAQQDSNVIRVTLKGHSLKTKCKKECIPTVK
GKLSDFLKPQENKISFKPYVRIDSSRELASLCTIVNRPEEEQLFIQARKKSSLKIKNSVT
FTKAIPNSSVMLQGPLVNKSLTDRCLVCCLCGKPANYRELGDLCGPYYPAESVPRKTLSL
MHREDFRQNRDREKDKATSCSAEQISALRREGGKDLLQEGTSEGDCGQPRRERRAQLRSR
LGLLMRFKRLQLLQETSGGAAPPAGKEGCGSGLQRLQQEAEAKEHWAHEACTIWTSGVIL
VAGKLYGLKEAAQDSTVTKCSKCQTEGASIGCRWKNCTYTYHYVCAKETGCIFEEDTFSI
KCPKHKAV
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatggcaaccagcactgctaccagcaggaa
ccccatgaattatcacgccttgagagttacagacatcatcacggccagaccagacagggc
tacgaggtgaacactcttgctgctgcagggatgccaacagcaggagcagcatctaaagac
tgttatgggcagcagacctaccccagctatagcagcagttcagctcagaccaagaaacca
tacagaggaggtaaagcaccgagccagcacctgcaatctggttacagcagtcacatgagc
tctggatactcagcccagtacatgagtgagggacacttacagaagtgggatgagtccacg
caaatgtctcagtatgagcaggacatggtgggccgtcttgagcctggggtcagcgggtca
tcccagtaccttgagcaaaatattctagccatttctcaaagccagtgccatctcccttcc
caaccctctacccctgtctatacaagcccccatcaacagggccacactcccaatcctact
ccatctcctttgatgtacccacagagccaccttcatttctcgcagcactcccaaccgccc
tcctcgacctcttcatcttacatggagaaatgcaatccgattcctcacagctacaaaagt
ggctatggaatgccacctaatgcccaatattcaaggcagctgggtaaccatagcagtctg
aagcagagtggctatcgaccacaaaatagttatggttaccagcagcctccttcaagagct
ggatttgaacagcaggcttcccttcaaggaatgtcaggtacaccagagaatcttcagaaa
ttccaacattacaatcagccgcaacagaactattgcctcacagacatttccgtgaggtcg
cctgaacagtattaccagaactgcagtccaagctctagccattcacctgcacgatctgtg
ggaaggtctccctcgtacagttctaccccttctcccttaatgcccaatcctgatacattc
cagtatggccaacaaatcaatcctacagcttcctcctcctctgcaggtttgcaagaccag
gccatgttaatgcctccacacacccatccatcccccagtgtcaatcaccagtctcagagc
tactctggctctatgaaggaacgtttctcagagaagcttttgtccaacccgagcttgtgg
agcctcaatgctctaacatctcaggtagagaatatctccaacaacgtccagcagttattg
ttatcagaagctcttatggccagcaaaaaaggcggcaagcgaaaccagccaaaaaaggga
gaggactatagggggcagttaaggcctatagaggactcttcatgtcctgaaagtcaacac
ggtgctccccacactgatgcttttggcaacccaagatctatgcctggtgagatacaagag
ggagggtactccagcagcactgaagaccagatggataggagctactattactttggccag
aacaaaggcccaacacaggcatcagcacattcccagctgagcctggacacagtgtctact
tgctcaatgaactcaacagatgatatgtccatcagatcaggggattcagtccgaagtctg
cagacctttgaggataatctgaactgtgaccctagggttcagagagtaccatttggagag
gaacacaatagttcactccgaagcattagagatgagaggtcccccattagtgtaacagcc
ccaagccctatgaagcaggagagcaattctccattagacttaaagcaagctgagagtact
ctgaaggagaactttgaggagtctgcttggtctgagaggatggctgaagaaaaggaattt
ggaaagaagaatttgtccacagaactcaaatgcaaaggagaagtcatggaggcaagtgag
aaacaacaagagtggttagaggatgagaaatgcccctctctttttcataagataaataaa
gcagtgtcagatgaaagctactcgtatgaaacagatgacactatttatcaggaactgaaa
aacaaatatgaggcagaggaaggagattttgctgaaaaggaccattcagacaccagccac
aagggaactgaagattcagaaatgaaatctgaaatattcaaaacagaaccacagcctaat
gttgaaggctctgtgtcaacatcaccagctatttcaagagacatccttgagtcagatcaa
tatttacctgagaaagaggaaaactcagacacacctcatctcacctctcagactgaatct
tcagaagagaggctgtcagtctctgagggacagaatgattcctttgagcagcagtcagtc
tcatcccatctggccactgaggtgagagaggagaaggagagtctgacacccactgaagag
gtggttaataataaagcaaaaccagaggagtcctctgcagaggcctgtaataagccagag
gagacggcaggcagaccactcatcagcactgaaactgcagagaccactgcccaagacaca
acccacagaagcagtgaaaggaggtcagctgcatgtgacattgcacctcagtctcactct
gtcaagactggcttctcagctctcaatgagaaaacaacacctcagactcaggcaagggat
cacatcgatcgcagcgatgcaaaggtgctggagcctgactctcctcagttgccaggcaag
tcaatactgcactctgcaccatcttgggcggataccccaccctccccacagaaaggagat
gaggatatagaaccaggtataagctgtcctagtgcagtaacaccatcagcaaaaccagag
ccggtggctccatctgcacatccaagactgctgggcaggaagcatgcacggggtaggagg
agactaatccattcaaatgcagggatcaggagacagccaagtgtggagggagatggagcc
ccgccatctcctcaaaaacccagcatgccctcaagtaatagtgccctcttccctgatcag
atgggggctgctcagctggacattagtagccaaacaccaaaacttctggcagatggttta
ccatccaggatgtgtacacgttcttttgggacacagaataccccaaaagtttgttctcca
gagagaaaaaagccaggtccaaagcatagttcaaaacctggcccaaaacctgggccgaag
ctaggaccaaaacctgtcccaaagcctgttctaaaacctggtccaaaggctggtttaaaa
ccaggtctaaaatctggtccaaaacctagcccaaagcaaagttcaaaacctgttccaaag
ccgggtttaaagcctggacccaaaccttgctcaaaatctggaccaaaaccaggcccaaaa
cctggggctgtgccaactgtaaaacctggtccaaagcctggtcctaagcctccagctata
cctgctttgaagactggtccaaagcctggttcaaagcctacagatggagtaattccgaaa
ggccctggccgaccaagaggcctcagttctaagatcaaaacaataaaacatgaagagaat
gtacaggccatcacagaacatattaaagatacaagttacatcagtgaaaaaagtgagcag
caagaaagcccagccaacactttggacactgttgttggtactactttaggttcctctgca
gacaatactatgggctctgctttggaagctcctatagaaaacacttctttaaagtctgta
gcaaaagatcaaaagtccatggtattaagatctcggaagcaaacacaggtaaaattaact
gaggacaaggagaaagaaaaagagacactgactgagacttcagcagtaaaactcactgag
acacaaatacaggaagtgactgcatctcagccatttgtgagccaaacttcaaaccttaaa
tctccaagccaggaggaagtctgcatggattcacttactcaacctaatgaggaggttgtg
tctgtttcagtcaaaagaaaatctagcttacagtcctcagagccagtaaagaagaagaaa
ggtgttaaagccagtaaaaaaacaaaaacacaggaaccacctttaaaaaccaccgtggtt
ggagccaagggttccaggggacagcgaaagcgaggacataaattagaatctgactgcagc
attctgatcaaagataacactccccctgaagatatcggtgacacaccttgcgtgcctcct
cagtgccctactaaaacaaaatatctgccaccaaggaaaggcagaggacttaaatatgaa
gctatggttcagaaaatcacatctccagcatccaaaaaacagcctctaacgatccaacca
gatgttgtgccggaagaatcagcatcaaagccagcaccagaggtaacagaaaagagagag
acagtaaataccccagaggtggcaccagaggagggtgagaacacagttagcattgaggag
accccagacacagcatgcatcccaactcctaagaagaagcggagaaagtgggccgctgtt
gagtgcactgacaccccggatgtggcactagagaccggcagccttattatcaacacacca
aggttagccaaacagagagccatcaaaaataaccatgaaatgcatctgaagcaacgcaag
aagaggaggaaagacgctgagctagcaaatagtgtgccagttatggaacaggtggagcag
aacaagcctgatgtacccatctctcccccagcactttcaccctcaccaccttcaccttca
ccaccaccaccaccaccctcctctgtttccccagacacagatgagaagacacagaaggaa
cagtcacctatggaaatatgctctataatcatcaaacccaaacggggcagacggccatca
cttaaaaagcagcaggaagaggccttaggtcaaagcccggtaaaagaagaaggtcaaaag
gtcaaaaaaaagcctggtcctaaaaaaaaggcccaacaggatagtaatgtcatcagggtc
actttaaagggacattcgcttaagacaaaatgcaaaaaagagtgcattcctactgtgaag
gggaaattgtcagattttttgaaaccacaagaaaacaaaatttctttcaaaccatatgta
cgcatcgacagctccagagagcttgcctccctttgcacgattgtaaacaggccggaggaa
gagcagctgttcattcaggcaaggaaaaagagctcactaaaaattaaaaactcagtcaca
tttaccaaggcaataccaaactcttcagtaatgctccaggggcccttagttaacaaaagc
ctaactgacaggtgtctggtatgctgcctgtgtggaaagccagcaaattacagagagctt
ggggacttgtgtggcccgtactaccctgcagaaagcgtaccacggaaaacactttcttta
atgcaccgggaggacttcaggcaaaacagagaccgagaaaaagacaaggccaccagctgc
agcgcagaacagatcagcgctctgaggagagagggagggaaggacttgcttcaagaaggg
acgagtgaaggagattgcgggcagccgaggagagaaagaagggcacaacttagaagtcgt
cttggcttgctgatgaggtttaaaagactgcagctgttgcaggagacatctggtggagca
gcaccccctgctggtaaggagggctgtggctcaggtctgcagaggttgcagcaggaggct
gaggctaaggagcactgggcacatgaggcctgtactatctggaccagcggcgtgatcctg
gttgcaggcaaactgtatggactgaaggaagctgcacaggactccacagtcacaaaatgt
tctaagtgccagactgagggtgcctccattggctgccgctggaagaactgcacttatacg
taccactatgtctgcgccaaagaaaccggctgcatattcgaagaggacacattctcgata
aaatgtccaaaacacaaggcggtgtaa
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integrated database retrieval system