Colossoma macropomum (tambaqui): 118821716
Help
Entry
118821716 CDS
T09004
Symbol
rbbp6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118821716 (rbbp6)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118821716 (rbbp6)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
U-box type E3
118821716 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
118821716
NCBI-ProteinID:
XP_036446344
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSELKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGVKAASKTFVIDRSEPSGGPSKAIDDSPSISLAQLSKTANLA
EANASEEDKIKAMMSQSNHEYDPIHYTKKLVGPPPPNYTCFRCGKNGHYIRNCPTNGDKS
FESTQRIRKSTGIPRSFMMEVDDPSMKGVMLTNTGTYAIPTIDAEAYAIGKKEKPPFLPQ
EQSSSSEDEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTSLLESEEHVCPTCNQ
SEVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAAAAAASAQATPPAAQTQLRVQRPV
QTLRPPNSRQQDPLLANVPRPAAANTPPAALSPVVTQQAPSTPPTGGGSSAAGGSSPAQS
PPQETSKQEDPVITKEPEVQPPTTTVSSETPLPTPVIPKGYHVPVIGQPHSLPHPLPRPA
QPRPSGPRPSGPRPTWDPSSSRSRAPSERPLRQQAPPVQPPPPVAPPVYVPPLFPPPQHT
MPQPPGVVAQQYPMQYPPGQQPAPPYTVPPPGYPPAPANVPTPWVPPGTQPPMPNPMPSM
NPAPFLSKEEFYRQQRRLKEDPHCRFVTREKSKLEEFTNDFAKELLEYRKIQKERRRSYS
RSKSPYRGSSYSGSSYSYSRSRSRSRSPRSYSRSLSRSRSRSRSRSRSRSRSYSRSPYSR
RGRGRSRSYRSRSRTPPYHRSRTRSPSYRGRDGGMSGIYRSRSRSPHYRGHSPGKKLLPG
SQLEVDRKYPGRYREIPPYDAKAYYGRAVDQSDPYERERYLEWEREYREWYEKYFKNYDA
PQGSQIRGRGPGRDPYSPDRYAPPRPRDNSPYARGRRDDYPPHGQGHSIPPRGRPMTYQE
KCAEKYGHLHVNNAGAGRGLSKESLKPTKDREPSTSTAVDSKGLKHKKHRKKRKGEEGDL
FSHSDSMDESKKDERKGDSGMLMNSTRDDATPVRDEPMDSTAVPYKSTSDKEKKEKTKSK
TEKVKRKAESGAPKKETSVKTSKPAREKEADATREKAASTEPAIKRIKEEPAQKADASKP
HSSDKLMLPRKLMQSRPIKHHQEQKPIKDEPKVKKEPVKDSAKPEKPLAKDGKPKLEKPV
KTEEKAVVKTGEVKVVEKRKRKDEKPLVKDPELPSNKSPRVEVTEMAKGSPKPKPKVESE
KPVEREKPAIPALMDIKPEPVRKIKLNREIGKRISTERLSADDSGPGSGKNRLDQKSKAK
IRRRVHATDGSGSMLVDYTSTSSTGGSPIKRHQEEKADLKKTVVKTLEEYTNDSSTPAED
EIVMIQVPRSKWEKEDYESEEDDSKAATTSANAGLSAASAAPAGENAASKLTDRESEKTA
HASKDTHTETKPAKDPSLSDMETDREKESERERERGRERDRSASDRESSDKRKAGTVNLD
RGSDHGSERSSSSQSSRDRPADRSAPSSRKPSGREHNTSVPERKPDHRTSARDHSDSRQR
DGKPREPLRRKESSPPPLSRGNKERDVHTEVAKRAPAVSQETKKTENSPSTEKRSTSQTH
IVTESRRTAPEDHRADRQAQNVRHIDGRSAKDKEHPGHKAAHRTASPEPRTEAERVGAHV
EREHPKVKPPSIRSMRLSSDLARETDEAAFVPDYSESDSEASDPESKAELREHGRDSSAS
PAPSHSASPSGSHGHSSSPSSPGSQDSKKRKKDKKDKKEKKKHKKHKKHKKHKKHASNES
ESEPKGQKHKHKKKKSKKSKDKEKDEKDKEKDERTKDEPKEREPV
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgttcactataagttttcctccaaactgaactacgacacggtgacgttcgac
gggctacacatcacgctgagtgagctaaagaggcagatcatgggccgagagaagctgaag
gccgcagactgcgacctgcagatcaccaacgcccagactaaagaggaatacactgatgat
ggggcgctcatccccaaaaattcctctgtcatcatcagacggatcccaatcggtggagtt
aaagcagccagcaaaacttttgtcatcgatcgatccgaaccctcaggtggaccttcaaaa
gcaattgatgattctccatccatttctctggcccagctatcaaagacggccaatctcgcc
gaagcgaacgcgtcagaggaagacaaaattaaagcaatgatgtctcagtccaatcatgaa
tacgacccgattcactacactaagaagctggttggacccccccctccaaactacacttgc
ttccgctgtgggaaaaatggacactacattagaaactgcccaaccaatggggacaaaagt
tttgagagtactcagcgcatcaggaagagcaccggaattcctcggagtttcatgatggag
gtggacgatccgtctatgaagggggtcatgttgaccaacactggaacatacgctattccc
accatcgacgcggaagcgtatgcgattgggaagaaggagaagcctccgtttcttcctcag
gagcagtcctcttcttccgaggatgaggatcctgtgcccgatgagctgctctgtctgatc
tgtaaggacctgatgaccgacgctgtggtcatcccctgctgcgggaacagctactgtgac
gagtgtattcggacgagtttgctggagtcggaggagcatgtgtgccccacctgtaaccag
tctgaagtttctcctgatgctttgattgccaataaattcttacgccaagccgtgaacaac
ttcaggaacgagacgggttacacaaagagaatccgtaaagctgctgctgctgctgctgct
gcttctgctcaggccacccctcctgcggcccaaacccagctgcgcgtgcagcgtcctgtc
caaaccctcagaccccccaactcccgccagcaggacccgctgctggccaacgttcctcgt
cccgcagcggcaaacacgccccctgctgccctgagccccgtggtcactcaacaggccccc
agcacgccccctactggtggcggttcttctgcagctggcggcagcagcccggctcagtcc
cccccgcaggaaaccagcaagcaggaagaccctgttataaccaaagagcctgaggttcag
ccaccgacgactactgtttcatcagagactccactgccaaccccagttattccaaagggc
taccatgttccagtgattggacaaccacactctctgcctcacccacttcccagaccagca
caaccaagacctagcgggccaagaccatctggaccccggcctacatgggatccgtcctcg
agccgcagccgggcccccagtgagcggcccctgaggcagcaggctcctccagttcagcct
cctcctcctgtggctcctccggtatatgttcctcctctgttcccccctccgcagcacacc
atgccccagccccccggcgtcgttgcccagcagtacccgatgcagtatccccctggccag
cagcctgcgcccccgtataccgttcctcctccgggatatcctccagcaccggctaacgtt
ccgactccatgggtaccgccaggcactcagccgccaatgcccaaccccatgccttccatg
aaccctgcacccttcttatccaaggaggagttctacagacagcagcggagactgaaggaa
gatccccactgtcgattcgttaccagggagaagtctaagcttgaggagtttaccaatgac
tttgcaaaagagcttctggagtacagaaagatccagaaggagagaagacgatcctattcc
aggtcaaaatctccataccgtggttcatcgtacagtggttcttcctactcctactccaga
tcacgctctcgctccagatccccacgctcctactctcgctctctgagccgctcgcgttcc
aggtcacgctctcgatcccgttctcgttctcgctcctattcacgctctccatactcccgt
aggggccgtggcagaagccgaagttaccggtcccgatcccgtacacctccttaccatcgc
tctcgcacccgctctccttcatatagaggacgagacggaggaatgagtggcatttatcgc
tctcgctccagatcaccacactacaggggccacagtccaggcaagaagcttctgcctggc
tctcagttggaagttgaccgcaagtacccaggcaggtaccgagagattccaccttatgat
gccaaggcttactatggcagagcagttgaccagagcgacccatacgagcgggaaaggtac
cttgagtgggagcgagagtacagagagtggtacgagaagtatttcaaaaactacgatgcc
ccacagggcagtcagatcagaggtcgcgggccaggcagagatccttactcccctgatcgt
tatgctccacccagacccagagataactctccctacgccagaggacgacgtgatgactat
ccgccgcatggccaaggacacagcatccctccgagaggccgtcctatgacttaccaagag
aagtgtgctgaaaagtacggccacctccatgtcaacaatgcgggagcagggagaggcttg
agcaaagaatccctaaaacccaccaaagaccgggagccaagcacaagcaccgctgtggac
tccaagggtctgaagcacaagaaacacaggaagaagagaaaaggggaggagggcgatctc
ttcagccactctgactccatggatgaatccaaaaaagacgagaggaagggggactctgga
atgctgatgaactcaactcgtgacgatgccaccccagtcagagatgagccaatggacagc
actgcagtgccctacaagagtacctcggacaaggagaaaaaggagaagaccaaaagcaaa
acagaaaaagtcaaacgcaaggccgagagtggcgcgccaaagaaggaaacctccgtaaag
acgtctaagcctgccagagaaaaggaggcagatgcaacccgagagaaggcagcatccact
gaaccggctattaagagaatcaaggaagaaccggctcagaaggctgatgctagcaagccg
cattcctctgacaaactcatgcttcctcgcaagctgatgcagtctagaccaatcaaacac
caccaagagcagaagcccatcaaagacgagcctaaagtcaagaaggaacctgtcaaagac
tctgcgaagcctgagaaacctctcgctaaagatgggaagcccaaattagagaagcctgtc
aaaactgaggagaaagcagttgtcaaaacaggtgaggtaaaggtggtggaaaaacggaaa
cgaaaagatgaaaagccacttgtgaaagacccagagctcccttcgaataagtctccgagg
gttgaagtcacagagatggccaaagggtctcccaagcccaaacccaaggtggagagtgag
aagccggtggagagggagaaaccagccatccctgctctgatggacataaagcctgagcct
gtgagaaagatcaagctcaaccgtgagattgggaagaggatcagtactgagagactttct
gctgacgactctgggcctggctcagggaaaaataggctggaccaaaagtctaaggccaag
atccgacggcgggtgcacgccacggacggatcaggatccatgttagtcgactacaccagc
actagctccactggcggtagtcccatcaagaggcatcaggaggagaaggcagacctgaag
aagactgtggtgaagaccctggaggaatacaccaacgacagctccacacctgctgaggat
gagatcgttatgatccaagtgccccgctctaagtgggagaaggaagactatgaatctgag
gaggacgattccaaggcagcgactacttctgcgaatgctggcctttctgctgctagcgct
gctcctgctggggagaatgctgcttcaaaactcaccgacagggagtctgagaaaactgcc
catgcctctaaagacactcatactgagacgaaacctgccaaggatccgtcgttgagtgat
atggagacagacagggagaaagaaagcgagagggagcgcgagagaggaagagaacgagac
cgtagtgcctcagatcgcgagtcttcagacaagaggaaagctggcacggtaaatttggat
agaggtagcgaccacggcagcgagaggagttcttcctcccagtcctccagggacagacct
gctgataggtctgcaccatcttccaggaagccatcaggaagggaacataatacaagcgtc
cctgaaaggaagccggatcacaggactagcgcaagagaccattcggattcccggcagaga
gacgggaaaccaagggaacccctcaggaggaaagaatcgtctcctccgccactttccagg
ggtaataaagaacgtgacgtccacacagaagtggccaaaagagctcctgcggtttcccag
gagaccaaaaagactgaaaacagcccttctacagaaaaaagatcaacgtctcagactcac
attgttacagaatccagaagaactgccccagaggatcacagggcagataggcaagcacag
aatgtgaggcatattgatggacgatccgcaaaggataaggaacacccaggacacaaagct
gcacataggactgcttctccagaacccaggaccgaggcagagcgagtcggagctcatgtg
gaacgagagcatcccaaagtcaagcctccctcaatacgatccatgcggctttcctcggac
cttgcgcgagaaacggacgaagcggcgttcgtccccgattacagcgaaagcgacagcgag
gcttccgatcccgagagcaaggctgagcttagggagcatgggagggacagcagcgcaagc
cccgcccccagccacagcgccagcccctctggaagccacggccacagcagctcccccagc
tctcccggcagccaggacagcaagaagaggaaaaaggacaaaaaggacaagaaagagaaa
aagaagcacaaaaagcacaaaaaacacaaaaaacataagaagcacgccagcaacgagtct
gagtcggagcctaaaggacagaaacacaagcataagaaaaagaaatccaaaaagagtaag
gacaaggagaaggacgaaaaggacaaggagaaggacgagaggacgaaagatgagccgaag
gagagagagcctgtttaa
DBGET
integrated database retrieval system
