Colossoma macropomum (tambaqui): 118821859
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Entry
118821859 CDS
T09004
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118821859 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118821859 (prpf3)
Spliceosome [BR:
cmao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118821859 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
118821859
NCBI-ProteinID:
XP_036446500
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAS
GFVERLFEALEESKNSRGNKGTGEKNRKRELKDVFGDEVEGGKDAESGEVAAKKKRVPRF
EEVEEPEVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSFVAPVSVPQPRLPLAP
PQPETPASRPILPSLGAPSVGTPQSIAPSQAASFMNDAIEKARKAAELQAKIQSTLAMKP
GILGTLSNTGPHNLVALANLHAMGIAPPKVEAREITKPTPLILDELGRTVDASGKEVELT
HRMPTLKANIRAVKREQFRQQLKEKPTDDLESTSYFDPRMSVAPPQRPRKGFKFHEKGRF
EKIAQRIRTKTQLERLQMEIAQAAKKTGIQASTKLALIAPKKELGEGEVPSIEWWDSYIL
PSNVELSAETVFDGLEFHGVTNLVEHPAQMAPPVDPDQPVTLGVYLTKKEQKKLRRQTRR
EGQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEA
NAARKLTAEQRKEKKVKKLREDLSQGVHIAVYRIRNLYNPAKKFKVEANARELYLTGTVV
LHKDVNIVVVEGGPKSQKKFKRLMLNRIKWDEPSSKREDPDGSDEEGSKKHNKCTLVWEG
TAKERSFGDMKFKQCPTENMAREHFKKHGTEHYWDLALSQSILESADD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcccaagcgggaggttgaggagctgcggccttgggtggagcggacggtaaaa
aaggtgcttggcttctcagaaccgactgtggtcactgcagctctgcactgtgtagggaag
gggctggacaaaagaaagacaacagatcagctgagaccgtttctcgatgattctgcaagt
ggctttgtggagcgactctttgaggccctggaggagagtaagaactctcgaggcaacaag
ggtacaggagagaagaaccgcaagagagagctgaaggatgtatttggtgatgaagtggaa
gggggcaaggatgcagagagtggtgaagttgcagcaaaaaagaagagggtgcctcgcttt
gaggaggttgaggagccagaagtcctacctggacctcctacagagagccctggaatgctc
accaagatgcagataaagcagatgatggaagcagccacgcggcagattgaggagaggaaa
aagcagctcagttttgtagctccagtttctgtccctcagcctagactgccgctggctcca
ccccagccagagacccctgcctcacgtcccattctacccagcctgggtgctccttcagtg
ggaacgcctcagtccatcgccccctcccaggctgctagcttcatgaatgatgccattgag
aaggcccgcaaggcggctgagctccaggctaagatccagtccaccctagccatgaagcct
ggcatcctggggactttgagcaacacgggaccacacaaccttgtagcgctagccaaccta
cacgccatggggattgcaccacctaaagttgaggctcgtgagatcacgaagccaacaccc
ctcattctggacgagcttggaagaactgttgatgccagtggcaaggaagtggaactcaca
caccgtatgcccactctcaaagctaatattagggcagtgaagagagagcagtttaggcag
cagctgaaggagaagcctactgatgatcttgaatccacctcctactttgaccctcggatg
tctgtagcaccaccacagagacctaggaagggctttaagttccatgagaaaggtcgcttt
gagaaaatagcccagaggatacgcacaaagactcagctggagaggctgcagatggaaatt
gcacaggctgctaagaaaactgggatccaggcctcaaccaagctggctttgatcgccccc
aagaaggagcttggggagggagaggtgccttcgatcgagtggtgggattcctacatcctg
ccctccaacgtagagctttctgccgagacagtatttgatggtttggagttccatggggtc
actaatttggtggagcatccagcccaaatggcccctccagtggacccagaccaaccagtg
acgctgggtgtgtatctgacaaagaaggagcagaagaagctgcggcggcagacgcgtcga
gaggggcagaaagaggttcaagagaaggtccgacttggtctcatgccgccaccagaaccc
aaagtgcgcatctctaatctgatgcgtgtgctggggacggaggcggtgcaggatcctacg
aaggtggaggcccacgtccgagcacagatggccaagagacaaaaggcccatgaagaggcg
aacgcagcgcgtaagctcacagcagaacagaggaaggagaagaaagtaaagaagctgagg
gaggatctgagtcagggagtccacattgctgtctataggatccgaaatctgtataatcca
gccaagaagttcaaagtggaggccaatgcacgcgagctctacctcacaggcaccgtggtg
ctgcacaaagatgtcaacatcgtagtggtggagggaggacccaaatcccaaaagaagttt
aagaggctgatgctgaacaggatcaaatgggacgagcccagttcaaagagagaagaccct
gatggttcagacgaagagggatcaaagaagcacaacaagtgcacactggtttgggagggt
acagctaaagagcgcagttttggggacatgaagttcaagcagtgtcctacggagaacatg
gcacgggagcattttaagaagcatggcacggagcactactgggacctggccctgagccag
agcatcctggagagcgctgatgactga
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