Colossoma macropomum (tambaqui): 118821938
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Entry
118821938 CDS
T09004
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118821938 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118821938 (hnrnpa1b)
03041 Spliceosome [BR:
cmao03041
]
118821938 (hnrnpa1b)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118821938 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
118821938 (hnrnpa1b)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
hnRNP proteins
118821938 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
118821938
NCBI-ProteinID:
XP_036446527
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MSKESQPRGPEQLRKLFIGGLSFETTDESLRSYYEQWGTLTDCVVMKDPNSKRSRGFGFV
TYSSVEEVDAAMSARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKEDTEESH
LRDYFDQFGKIEAIEIMVDHKTGNKRGFAFVTFEDHDSVDRIVIQKYHTINGHNCEVRKA
VSKQEMQNFSGNVRGGRGGGNFGRHGNGGYSNDFGGSRDGYFGGRGDRGGGGYGGGDAYN
NGFGGDGGYGGGPGYGGNRGYGGGGGGPGYGNQGGGGYGGGGGGGNGYDNYNNGGNGNFG
GGSFGGGGSSGSNYNDFGNYNSQQSNYGPMKGNFGGGRNSGPYGGGYGGGSGGGGYGGSG
GGRRF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggagagccagccacgcgggccggagcagctcaggaagctgtttattggaggc
ctcagctttgagaccacggacgagagcttgaggtcatattatgaacaatggggcacacta
actgactgtgtggttatgaaggatccaaactccaagcggtctaggggctttggatttgtc
acatactccagtgtggaggaagtagatgctgctatgagtgcacgcccccacaaagtcgat
ggtaggcttgtggagcctaaacgtgctgtttctagagaggactccaacaaaccatttgca
cacacaactgtgaaaaagatttttgtgggtggcatcaaagaagatacagaggagtcccat
ctccgtgactactttgatcagtttgggaagatcgaggctattgaaataatggttgatcac
aagactggaaacaaaaggggctttgcttttgttacatttgaagaccatgactcagtggat
cgcatagttattcaaaagtaccacacaataaatggccacaactgtgaagtaagaaaggct
gtctccaagcaagagatgcagaacttctcagggaacgtgagaggtggacgtgggggtgga
aactttggccgacatggcaacggaggttacagcaatgactttggaggtagcagagatggt
tactttggtggccgaggggacagaggtggtggagggtatggaggtggagatgcctacaat
aatggatttggaggagatggtggttatggaggtggccctggttatggaggcaaccgtggc
tatggtggcggtggaggtggaccaggctatggcaatcagggaggcggagggtatggtggt
ggtggtggcggcggtaatggctatgacaactacaacaacggtggcaatggaaactttggc
ggtggtagctttggaggcggtggcagcagtggcagcaattacaatgattttggcaactac
aacagccaacagtcaaattatggccccatgaaaggaaactttggaggaggcagaaacagt
ggcccatatggtggtggatatggtggtggttcaggaggtggaggatatggtggctctggg
ggaggcagacggttttaa
DBGET
integrated database retrieval system
