Colossoma macropomum (tambaqui): 118821963
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Entry
118821963 CDS
T09004
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118821963 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118821963 (tbpl1)
03021 Transcription machinery [BR:
cmao03021
]
118821963 (tbpl1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118821963 (tbpl1)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118821963 (tbpl1)
RNA polymerase III system
TFIIIB
118821963 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
118821963 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
118821963
NCBI-ProteinID:
XP_036446565
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MEPVEQSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGNNVIYKPEVGKVLMKLRKPRIT
ASIWSSGKIICTGATSEDEAKLGARRLARCLQKIGFKVRFSDFKVVNVLAVCSLPFQIRL
IEFTKNNRPIASYEPEIHPAASYRIKNLRATVQVFSTGSITVTGPNVQNVAMAVEQIYPL
LLECQKTLV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtggaacagagtaatgatgtggcgctggacattatcattacgaacgtggtt
tctgtctttagaaccaggtgccatctgaacctccgcaccattggcctggaggggaataac
gttatctataagccagaagttggaaaagttctgatgaagctacggaaacctcgcatcact
gcctccatatggtcatcagggaaaatcatttgcactggagcaacaagtgaggatgaagct
aaactcggagccagaaggttagcccgctgcctccagaagataggtttcaaggtgaggttt
tcagacttcaaggttgtaaatgtcctggcagtctgctctctgccttttcagatccgtctc
attgagttcactaagaacaaccgtcccattgccagttatgagcctgagattcaccctgct
gcatcatacagaatcaaaaacctcagggccacagtgcaagtgttctctacaggcagtata
acagtaacaggaccaaatgttcagaatgttgccatggctgtggaacagatatatcctcta
ctgcttgagtgtcagaaaacactggtgtaa
DBGET
integrated database retrieval system