Colossoma macropomum (tambaqui): 118822064
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Entry
118822064 CDS
T09004
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118822064 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118822064 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118822064 (srsf6a)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
SR proteins
118822064 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
118822064
NCBI-ProteinID:
XP_036446771
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDGYGGGGGGGGGGGYYGGGRSGYSSRSRSGRDKYGPPVRTEYR
LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALEKLDGTDI
NGRKIRLIEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSRSRSRSRRHRSRS
RHKSRSRSGRKSRSKSPSSKSRSRKSHSRSRTHKSRSRSASRKSRSRSDTRKSRSKSTSK
VKSERGSRGQSKEKSTGKKSRSRSASPAENGNEERGKSASRSPSPQAEKSGSKSPERASR
SRSKSPSRSKSRSRSRSASQD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtttatatcggccgtttgagctaccacgtccgagaaaaggacatccagcgc
ttcttcagtggatatggcaagcttttggaagtcgatttaaaaaacgggtatggctttgtg
gagtttgaggatacccgagacgcagatgatgcggtttatgaactcaatggaaaagagcta
tgcggcgagagggtgatggtagagcatgcaagaggacctcggcgggatcgcgatggatat
ggtggaggaggaggaggaggaggaggaggaggttattatggtggaggccgcagtggctac
agcagcagaagtcgctcaggcagggacaagtatggccctccggttcgtaccgaataccga
ctgattgtggagaatctgtccagccgctgcagctggcaggacctgaaggacttcatgagg
caggccggggaggtgacctatgctgatgctcataaggagcgtaccaacgagggggtgatt
gagttccgctcacactctgacatgcggagggctctggagaaactcgatggtacagatatc
aatggcaggaagatccgtttgattgaggacaaaccacgtcgtcgccgctcgtactctgga
agtcgctctaggtcccgaagccgccgccgctctcgcagcaggagccgccgaagcagccgt
tctcgaagcaactcgagatctcgctcaaggtctcgttcccgccgtcatcgctccaggtcc
cgccataagtcccgttcccgctctggccgcaagtcccgctccaagtctccttccagcaag
tcccgctcacgcaagtcccactctcgctcccgcacccacaagtctcgcagcaggtcagcc
agccgcaagtcacgctcccgttctgacacccgcaagtcgcgctccaagagcacttccaaa
gtgaagtccgaacgtggctcccgtggccaatccaaggagaagtcaaccggtaagaaatca
cgcagccgctccgcctctcctgcggagaatggaaacgaagagcgtggcaagtctgcctct
cgctcaccttctcctcaggctgagaaaagtggttcaaagtctccggaacgggcttcccgc
tcccgctccaaatctccatctcgctccaaatccagatcccgatccagatccgcctcccag
gactag
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integrated database retrieval system
