Colossoma macropomum (tambaqui): 118822282
Help
Entry
118822282 CDS
T09004
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03250
Viral life cycle - HIV-1
cmao04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118822282 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118822282 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118822282 (samhd1)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118822282 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
118822282
NCBI-ProteinID:
XP_036447116
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
SYKHPSLLTLCLISLSFPCSTENFTNPQHPLDQGTGPQEPTKVFNDPIHGHIELHPLLVR
IIDTPQFQRLRHIKQLGGTYLVFPGASHSRFEHSVGVGHLAGRLVRVLKDRQPELGINKL
DILCVEIAGLCHDLGHGPFSHLFDGMFIPEVRPGIKWKHENASVQMFDHLVKVNNLMPEI
VKYGLTTNDLTFIKEQIEGPQDDTASGSKWLYKGRSEEKSFLYQIVANKKNGIDVDKWDY
FARDCYHLGMQSIFDHLRFLKFARVCEVEGEKHICSREKEVGNLYDMFYMRYRLHCKAYQ
HKVGNIIEFMITEALVKADPHIEIEGSEGKMFKMSEAIEDMEAYTKLTDHIFEQILYSSN
PKLSEAKNILQKIISRQLYKCVGQITPETVLEASQEKLKEYSSEVAKAKQSSNDVDLESE
DFIVRVVDLNYGQKDKNPIDEVYFYSKEDPTIPIKIDKNQVSKMLPTRFAEQKIRVYCKK
TVKKSLEAAKKHFEQWCSEKFSKPLDGDVMAAELTDQDCHIADDSESGSQVPRGYRRMTD
IYKAIKKHTNTSK
NT seq
1664 nt
NT seq
+upstream
nt +downstream
nt
taagttataagcacccctcacttcttacattatgtttgatatctctctcttttccgtgct
ccacagagaacttcacgaatcctcagcatcctctggaccagggcacagggcctcaggaac
ccacaaaggtttttaatgaccctatccatggccatatcgagctccatcctctgctggttc
gtatcattgacactcctcagttccagaggctgcggcacatcaagcagctcggaggaacat
acctggtgtttcctggagcttcgcacagccgctttgaacactcagtaggggttgggcatt
tggcaggtcgcctcgttcgagttttgaaagacagacagcctgaactcggcataaacaaac
tagacatcctgtgtgttgagatcgcagggctgtgccatgatttaggccatggtccgtttt
ctcatctgtttgatggcatgtttatccctgaagtccgacctgggataaaatggaagcatg
agaatgcctcagtgcagatgtttgaccacctggtgaaggtgaataatctgatgcctgaga
ttgtgaaatatggccttacaacaaatgacctcaccttcatcaaagagcaaattgaagggc
ctcaggacgacaccgcctcgggcagtaagtggctgtacaagggcagatcggaggagaagt
cttttttgtatcagattgtggcaaataaaaaaaacggcatcgacgtggacaagtgggact
attttgcaagagactgctaccacctgggcatgcagagtatctttgaccacctccggttcc
ttaagtttgcccgagtgtgtgaggtggaaggggagaagcacatctgtagcagagaaaagg
aagtaggtaacttgtacgacatgttttacatgcgttaccgcctgcattgcaaggcctatc
agcacaaagtgggtaacatcatcgagtttatgataacagaagccttggtgaaggcagacc
ctcacattgagatcgagggatctgaaggaaagatgttcaaaatgtcagaggccatagagg
acatggaggcttacaccaagctcacagaccacatctttgagcagatcctgtactcctcca
accctaaactgagcgaagctaagaacatcctccagaagatcatcagcagacagctgtata
aatgtgtgggacaaatcacacctgagacagtccttgaggcttcacaggaaaagctgaaag
aatattccagtgaggtggctaaggccaaacaaagcagcaatgatgtggatctagagtctg
aagacttcatagttagggttgttgacctgaactatgggcagaaggataaaaatcccatcg
atgaagtctatttctactctaaggaggaccccaccatacccatcaagatcgacaagaatc
aggtctccaagatgctgccgacgagatttgccgagcagaagatcagagtttactgcaaga
aaactgtcaagaagagtttagaggccgccaaaaagcactttgagcagtggtgctcggaaa
agttctccaaacctctggatggtgatgtcatggcagcagaactcactgaccaggactgcc
acattgctgacgacagtgaaagtggaagccaagtgccacgcggttatagaagaatgacag
atatttacaaggcgataaagaaacacacaaatacatcaaagtaa
DBGET
integrated database retrieval system
