KEGG   Colossoma macropomum (tambaqui): 118822358
Entry
118822358         CDS       T09004                                 
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
  KO
K24357  collagen type XX alpha
Organism
cmao  Colossoma macropomum (tambaqui)
SSDB
Motif
Pfam: fn3 VWA Collagen Ig_DSCAM-DSCAML_C Pur_ac_phosph_N VWA_2 FN3_Tor_3rd YjeF_N AP3D1
Other DBs
NCBI-GeneID: 118822358
NCBI-ProteinID: XP_036447253
LinkDB
Position
Unknown
AA seq 1556 aa
MAVITGIILVMLASEVYAQGRLKLTVLSEDRLQMKWKEAEGPVQGYRVRVRSISEVPQPE
MMLTTTRGKATVVGLDSRQEYLLQVLVLNGTGEKLIAKRRFTISGLREEELVRSGNREQK
KKALAVGSGSGEIDDVTEALESLPTVLYQEPTTTEPPTATEQEEQEVEKSGKDKKKKKKD
KHHAKSEEKERQVESREKSSEEDDKVRKTAATQSVTAGTSRKPFECRAGVQADLVLLVDG
SWSIGRTNFRKVREFLEGLVTPFHIGPDGVQIALSQYSGDPRTEWQLNNFTSREQLLDAV
RNFRYKGGNTFTGQALIHVLEENLKEEAGARPGTPHFLLLMTDGKSQDDAIAAANRLKNA
GVEIIAVGVKNADEAELRQVASEPLELNVYNVNDFPLLSKLVGRLVRILCGKIEDRSKAK
RMEHPTVDPVLSYPSPTDLQYSELGPKEVRVSWTGPSRIVQQYRVVFHSSEGQSPQEVVV
NGSVSTVMLTELSSQTQYHLSIFPVYEDNVGPPLRGIFTTMPLAMPHSLEVTASSPTSLR
VSWRPTPGATQYMALYSALTDGEPDDAREVKFGADETDVELQDLMPSTDYSVTLYALYDE
DPSDPVTAVATTFPLPSPLSMHFPMVSHSTLRVTWVPGAVSVPAHRITYSTNHGSDVKQV
EVAGVNTVLLQNLASLSRYLVSVQSHYEKGLSTPLIANVTTLRVPAPSELRVTNYSESAL
TVRWEPAADDVTSYLIKWISLSGGDLRQLKVDGESEGAILEGVEDDKEYQISLSALYADG
AQSEAVAIRYSTLSGGGPSSVSISEETAVSMLVSWVPPNAHVLQYRISYTPLTGGEAREN
TVSLPGSERRVLLQSLLPDTRYSVLVTAEYRNREGGSASAQGKTTSLRVSSVSVVRSDHS
SICVSWRPVIAVTAYRIVIQALRDKQIKEETVDSSSSSHCFSELQPETVYRISVHSRLGT
VESAAVTILHPTAAAPVRLQLPPRLHPIQNEVCPEMTIRNNVIKGFNMMEAFGLTQRAHS
TVEGVAAESFIFSFLPSYTLYRDTQLTQSTRFIHPAGFAPEHTISMMFRLLQDSPTEPFA
LWQLTDNDFQPKMGVVLDPERKVLLYFSLDYRGEVQELTFDQPQVHTLFYGSFHKIHLSV
SQVSVSLSVDCQRVGERPARPLGALPTDGFEMLGKLVRTRGPRSGSAAFQLQSFEIVCNT
TWASEDTCCDLPAQRDEESCPAPAYACTCTSDIPGAPGDAGPPGKPGPRGEKGEKGEEGQ
KGEMGPPGKGGPEGGFGPMGSVGPRGIAVMGKMGPPGIRGEKGDIGRPGNQGLPGPPGPK
GEEGKPGPKGTRGVEGNIGPPGTTGPRGFQGMPGHPGPVGERGPLGPVGPTGLPGSKGER
GEKGEPQSLAVIYQLVTQACEKLVHNEVLKIDAFLNEISRKPVPIQEPVGPPGEPGIPGG
RGSPGPRGPEGRQGDRGEQGKPGYPGEQGRRGLPGERGAPGINVQGPQGMKGFAGLPGET
KTGIQGPRGEDGKPGFPGNPGGVGQPGEIGPPGVCDSSGCHRGALPAVDPYFGYQP
NT seq 4671 nt   +upstreamnt  +downstreamnt
atggcagtcatcactgggataattctagtaatgctggcctctgaggtttatgctcaaggc
cgattaaagctgaccgttctatcagaggaccggctccagatgaagtggaaggaggctgag
gggccggtccaaggctacagggtccgagtgcggtccatctcagaagtgccccagccagaa
atgatgctgaccacaacgcggggcaaagccacagtggtagggctggactccagacaggaa
tacctgctgcaggtgctggtgctgaacggaactggagagaaacttatcgccaagagacgc
ttcaccatcagcgggctgcgggaggaggagctggtgcgcagcggcaaccgagagcagaaa
aagaaagcgctggccgtgggctctggctccggcgaaatagatgatgtgaccgaagcgctg
gaatcgctgcccaccgtgctctaccaggagcccaccaccacagagccccctactgcaact
gaacaggaagaacaggaggttgaaaagagtggcaaagataagaaaaagaaaaagaaagac
aagcatcatgcaaagtcagaggagaaggaaaggcaggttgaaagcagagagaagtcttcg
gaagaggacgacaaagtcagaaaaacagctgccacccaatctgtcacagctggtacatca
cggaagccatttgagtgcagggccggagtgcaggcggatctcgtcctgctggtggatggc
tcgtggagcatcggccgcaccaacttcagaaaagtacgagagttccttgaaggtctggtt
accccgttccacatcggcccagacggggtacaaatcgccctatcacagtacagtggagac
cctcgcactgagtggcagctgaacaacttcacttccagagagcagctcctggacgctgtc
cgaaactttagatacaaaggagggaacaccttcacaggtcaggctctcattcatgttctg
gaggagaatctgaaggaggaggcaggggctcggccaggcacccctcattttctgctgctg
atgactgatgggaagtctcaggatgatgccatcgctgctgcgaacagactgaagaatgca
ggagtggagatcatcgctgtgggtgtaaaaaatgcagatgaggctgagttgaggcaggtg
gcatctgagcctctggagctgaatgtgtataatgtgaatgatttccctctgctcagtaaa
ttggtcggtcgattagtgcgtattctgtgtgggaagatagaagaccgcagtaaagcaaag
cgaatggagcatcccactgtggaccctgtgctgtcataccccagccccaccgacctgcag
tactctgaactgggtcccaaagaggtgcgtgtgagctggactgggccgagtcgcattgtg
cagcagtacagggtggtgttccacagcagtgagggacagagcccacaggaggtggtggta
aacgggtcagtctccacagtaatgctgactgaactgtcctctcagacgcagtatcacctc
tcaatctttcctgtgtatgaagacaacgtgggccctccacttagaggcatcttcaccaca
atgccgctggccatgccacactctctggaggtcactgcatcttctcccactagtctgagg
gtgagttggaggccaactcctggagctacccagtacatggcactgtactcagcactcact
gatggggagcctgatgatgctcgagaggtgaagtttggggctgatgagacagatgtggag
ctgcaggatctgatgccctccacagattactcagtcacgctgtacgctttgtatgatgag
gaccccagcgaccctgtcacagccgtcgctaccacattcccattgccatctcctctcagt
atgcacttccctatggtgagtcacagcactctgagggtcacatgggtgcctggtgccgtc
agtgttcctgcccatcgcatcacctacagcaccaatcatggcagtgacgtcaaacaggtg
gaggtagccggtgtgaacacagtcctgctacagaatctggcctctctgtccaggtatctg
gtgtctgtgcagtcccactatgaaaaaggcttgtccaccccactcattgccaacgtcacc
acattaagagtgcctgctccatctgagctcagagtcactaactactcagagagtgcttta
acagtacgctgggagccagctgcagatgatgtgacctcatacctgattaaatggatctct
ctcagtggaggagacctgaggcagctaaaggtggatggggagagtgagggagccatattg
gagggagttgaggatgacaaggagtatcagatctcgctgtctgctctgtatgcggatgga
gcacagagtgaggctgtggctatacgatacagcacattgtcagggggaggtcccagctct
gtgtccatctctgaggagacagcggtcagcatgctggtcagttgggttccacctaacgca
catgtgctgcagtaccgcatatcatacacacctttaactggaggagaggcacgagagaac
acagtgtcgttgccaggcagtgaacgtcgtgttctgctgcagtctctgctgcctgacact
cgctacagtgtgctggttactgctgagtaccgcaacagagagggaggcagtgcctcagca
cagggcaaaaccaccagtctgcgtgtgagcagtgtgagtgtggtgcgctccgaccactcc
agtatctgtgtgtcctggaggccagtaatagccgttacagcttaccgcattgtcatccag
gccctcagagacaagcagataaaggaggaaaccgtggactccagcagcagcagtcactgt
ttctctgagctgcagccagagacagtgtatcgcattagtgtgcactcccgcttggggaca
gtagagagcgctgctgtcactattctccatcccacagccgcagcacctgtgagattacag
cttcctccacggctgcatcccatacagaatgaagtatgtcctgagatgaccatcagaaac
aatgtgataaaaggttttaatatgatggaggcgtttggtctgactcagagagctcattcc
acagtggagggcgtggcagcggagtcttttatcttcagctttttacccagctacaccctc
tacagagacacacagctcacccagagcacacgattcatccaccctgccggctttgctccg
gagcataccatcagcatgatgttccgcctgctgcaggactctcccacagaacctttcgcc
ctctggcagctcactgacaatgatttccagcccaagatgggggtggtgctggaccctgag
aggaaagtgttgctgtacttcagtctggactacagaggagaggtacaggagctgaccttc
gaccagccccaagtccacacactcttctatggcagcttccacaagattcacctgtctgtt
agtcaggtgagtgtgtccctgtctgtggactgtcagcgagttggagagagacctgctcgt
cctctcggagcgctacctactgacggctttgagatgctgggcaaactagtgaggactcgc
gggccccgaagtggatctgctgctttccagctacagtcttttgagatcgtgtgtaacacc
acctgggcttcagaggacacctgctgtgacctgcccgctcagagggatgaggagagttgc
cctgctcccgcttacgcatgcacctgcacctccgacatccctggagcacctggagatgct
ggtcctcctggcaaacctggtcctcgtggggagaaaggagaaaaaggggaggaaggacag
aagggtgaaatgggaccccctggcaagggagggcctgagggaggctttggccctatgggg
tctgtcggcccccgtggaatagcagtaatgggtaaaatggggcctccagggatacggggc
gaaaaaggagatattggacggcctgggaatcaagggttaccaggaccacctggcccaaaa
ggtgaagagggaaaaccaggaccaaaggggaccagaggtgtggagggtaacattggaccc
ccagggactactggaccaagaggtttccagggtatgcctggtcacccaggacctgttgga
gagaggggaccactaggacctgtagggccaacagggcttcctggaagtaagggcgagaga
ggagagaagggagagccgcagtctcttgccgttatttaccagcttgtcactcaggcttgt
gagaagctggtgcacaatgaagtgctgaagatagacgctttcctgaatgagatcagtcga
aagcctgtgcccatccaggagccggttgggcctccaggagagcccggaatcccaggtggg
agaggatccccagggccaagaggccctgagggacgacagggagacagaggagaacaaggc
aaaccagggtatcctggcgagcagggacgcagaggtttgcctggtgagagaggagctcca
gggattaatgttcagggaccacaaggaatgaagggttttgcagggcttccaggagaaacc
aagacagggatacaaggccctcgaggtgaggatggtaaaccaggttttcccggtaatccg
gggggtgtgggtcagccaggtgagattggaccccctggtgtgtgtgacagtagtggctgc
catcgaggagcgctcccagcagtggatccatactttggataccagccttga

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